RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 UBA2Q9UBT2 640 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FBXO5Q9UKT4 447 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CHKBQ9Y259 395 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ANKRD6Q9Y2G4 727 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 OR51B4Q9Y5P0 310 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 IRAK3Q9Y616 596 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 DOCK4Q8N1I0 1966 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 MYO18AQ92614 2054 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 A0A096LPK6 155 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 TGM5O43548 720 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 LDB2O43679 373 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 DNAJC6O75061 913 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 GJB3O75712 270 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 DCTN3O75935 186 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NDST3O95803 873 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 C1RP00736 705 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 PRLP01236 227 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 FGBP02675 491 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SERPINE1P05121 402 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 F7P08709 466 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 MBL2P11226 248 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 COL6A2P12110 1019 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CES1P23141 567 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SKIV2L2P42285 1042 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SLC1A2P43004 574 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 RGRP47804 291 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 LEPRP48357 1165 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NCALDP61601 193 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SMAD3P84022 425 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ARF5P84085 180 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 TMPRSS15P98073 1019 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 MPP1Q00013 466 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ITKQ08881 620 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NSUN2Q08J23 767 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ILF2Q12905 390 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 STX3Q13277 289 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 LAMB3Q13751 1172 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF235Q14590 738 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 DLG2Q15700 870 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CHI3L2Q15782 390 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SMAD1Q15797 465 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 TAF12Q16514 161 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 PCSK7Q16549 785 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC153Q494R4 210 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 HSF5Q4G112 596 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 FASTKD1Q53R41 847 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 FYB2Q5VWT5 728 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 FAM91A1Q658Y4 838 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NEPROQ6NW34 567 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC149Q6ZUS6 474 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 HTR3DQ70Z44 454 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 OTOP2Q7RTS6 562 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 DENND6AQ8IWF6 608 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 LMNTD2Q8IXW0 634 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 PLD6Q8N2A8 252 aaKnown RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 BBS5Q8N3I7 341 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 TMEM151AQ8N4L1 468 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 SLC25A41Q8N5S1 370 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ARL14EPQ8N8R7 260 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 KLHL23Q8NBE8 558 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 HJURPQ8NCD3 748 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-203ENST00000350034 GPR150Q8NGU9 434 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 RFWD2Q8NHY2 731 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CALML6Q8TD86 181 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 PPM1EQ8WY54 764 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NUDCD1Q96RS6 583 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 CYP2S1Q96SQ9 504 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 C20orf27Q9GZN8 174 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 MYLK2Q9H1R3 596 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 MFSD1Q9H3U5 465 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 THAP1Q9NVV9 213 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 COPG2Q9UBF2 871 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 LZTS1Q9Y250 596 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 INSL6Q9Y581 213 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ACTL7AQ9Y615 435 aa6.98□□□□□ -1.29
TRIM55-203ENST00000350034 ZFHX4Q86UP3 3567 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CXorf51AA0A1B0GTR3 108 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 FAM95CA0A1B0GW59 222 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TTC24A2A3L6 582 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC78A2IDD5 438 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TARM1B6A8C7 271 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 G3V2L1 256 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 GOLGA8TH3BQL2 631 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 NRG2O14511 850 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 INSIG1O15503 277 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TSPAN3O60637 253 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 RASSF9O75901 435 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 LUC7L3O95232 432 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 WISP3O95389 354 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CXCL14O95715 111 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 S1PR4O95977 384 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 APOA4P06727 396 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ADH1AP07327 375 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SERPINF2P08697 491 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SBK3P0C264 359 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms