RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DKK3Q9UBP4 350 aa10.43□□□□□ -0.74
CHRNA1-202ENST00000348749 ZNF112Q9UJU3 913 aa10.43□□□□□ -0.74
CHRNA1-202ENST00000348749 POU2F3Q9UKI9 436 aa10.43□□□□□ -0.74
CHRNA1-202ENST00000348749 PIK3R2O00459 728 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 MYO1DO94832 1006 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 TCEA1P23193 301 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SPRP35270 261 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 GMPRP36959 345 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 LEPRP48357 1165 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 LIMK2P53671 638 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 TIGD2Q4W5G0 525 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SMUG1Q53HV7 270 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 ARL13AQ5H913 290 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 GLRA4Q5JXX5 417 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 GTF2IRD2BQ6EKJ0 949 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 OR6B2Q6IFH4 312 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 CASC4Q6P4E1 433 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 CYP2R1Q6VVX0 501 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 GK5Q6ZS86 529 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 FAM183BPQ6ZVS7 135 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 USP51Q70EK9 711 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 GTF2IRD2Q86UP8 949 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 NIM1KQ8IY84 436 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 DHRSXQ8N5I4 330 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 ANKRD52Q8NB46 1076 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 CANT1Q8WVQ1 401 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SNX19Q92543 992 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 VMP1Q96GC9 406 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 MAGED4Q96JG8 741 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 MARK4Q96L34 752 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 PPP1R36Q96LQ0 422 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 APBA2Q99767 749 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 HERC2P3Q9BVR0 1158 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SEZ6LQ9BYH1 1024 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 DNAI2Q9GZS0 605 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 NMRAL1Q9HBL8 299 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 THG1LQ9NWX6 298 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 VPS51Q9UID3 782 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 ZDHHC2Q9UIJ5 367 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 TIMM22Q9Y584 194 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 SPO11Q9Y5K1 396 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 MGAMO43451 1857 aa10.42□□□□□ -0.74
CHRNA1-202ENST00000348749 A0A096LPK6 155 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 AQP12BA6NM10 295 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TRPC5OSA6NMA1 111 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TNFRSF10AO00220 468 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 EIF3FO00303 357 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 GMNNO75496 209 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CABYRO75952 493 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 KRT19P08727 400 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 EDNRBP24530 442 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 RAP1GAPP47736 663 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 GRIA4P48058 902 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 SLC26A2P50443 739 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 IFITM2Q01629 132 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 SLC6A3Q01959 620 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 RALGDSQ12967 914 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 FAM187BQ17R55 369 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TMTC4Q5T4D3 741 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 LRRC8EQ6NSJ5 796 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TRNP1Q6NT89 227 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 KCNT2Q6UVM3 1135 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 METTL7BQ6UX53 244 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CATSPERGQ6ZRH7 1159 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 PLPPR4Q7Z2D5 763 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TFAP2DQ7Z6R9 452 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 PSTKQ8IV42 348 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 AQP12AQ8IXF9 295 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 RNF149Q8NC42 400 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CYGBQ8WWM9 190 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CENPNQ96H22 339 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 FBXL20Q96IG2 436 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 HEXIM2Q96MH2 286 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TWNKQ96RR1 684 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CSF3RQ99062 836 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 SNRNP25Q9BV90 132 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 TRIM15Q9C019 465 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 IFT80Q9P2H3 777 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 ATP11BQ9Y2G3 1177 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 COL4A5P29400 1685 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 PTPRFP10586 1907 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 A0A0A0MRY4 1105 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 SDHDO14521 159 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 SLC22A1O15245 554 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 ACOX3O15254 700 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CYP2C8P10632 490 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 NCAM1P13591 858 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 CYP2F1P24903 491 aa10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 EEF1DP29692 281 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-202ENST00000348749 EPHX2P34913 555 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms