RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 APOBEC3HQ6NTF7 200 aaKnown RBP23.27■■□□□ 1.31
NPAS3-201ENST00000346562 GPR142Q7Z601 462 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 CERS2Q96G23 380 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 MCM8Q9UJA3 840 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 MCIDASD6RGH6 385 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 CYP1A2P05177 515 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ANXA8L1Q5VT79 327 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ZDHHC20Q5W0Z9 365 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ADAMTSL2Q86TH1 951 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 KIAA0319LQ8IZA0 1049 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ANKRD52Q8NB46 1076 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 PCDH12Q9NPG4 1184 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
NPAS3-201ENST00000346562 DDI2Q5TDH0 399 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 CPA6Q8N4T0 437 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 RNF148Q8N7C7 305 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 MYDGFQ969H8 173 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 ZNF844Q08AG5 666 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 VPS35Q96QK1 796 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 CRNNQ9UBG3 495 aaPredicted RBP23.26■■□□□ 1.31
NPAS3-201ENST00000346562 NTRK1P04629 796 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 MYBPC1Q00872 1141 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 DEPDC4Q8N2C3 294 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 TM6SF2Q9BZW4 377 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 LMAN2LQ9H0V9 348 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 DMGDHQ9UI17 866 aaKnown RBP23.26■■□□□ 1.31
NPAS3-201ENST00000346562 SORCS3Q9UPU3 1222 aa23.26■■□□□ 1.31
NPAS3-201ENST00000346562 MRPS33Q9Y291 106 aaKnown RBP23.26■■□□□ 1.31
NPAS3-201ENST00000346562 H3BNH8 94 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 AP3D1O14617 1153 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ABRQ12979 859 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ATP1A4Q13733 1029 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 LPIN1Q14693 890 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 RDH11Q8TC12 318 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 KAT5Q92993 513 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 MTRF1O75570 445 aaKnown RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 GPRIN3Q6ZVF9 776 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 OR10G6Q8NH81 332 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ACO2Q99798 780 aaKnown RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 AGO1Q9UL18 857 aaKnown RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 CCNIQ14094 377 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 CHKBQ9Y259 395 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 OR6C75A6NL08 312 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 RAB10P61026 200 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 LGALS3BPQ08380 585 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 MAPKAPK3Q16644 382 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 POP5Q969H6 163 aaKnown RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 MPP4Q96JB8 637 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 SEMA3CQ99985 751 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 MRPL57Q9BQC6 102 aaKnown RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 CHST7Q9NS84 486 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 KIAA1522Q9P206 1035 aaPredicted RBP23.25■■□□□ 1.31
NPAS3-201ENST00000346562 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 BMP7P18075 431 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ZNF670Q9BS34 389 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 FNDC11Q9BVV2 318 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 ANKZF1Q9H8Y5 726 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 C2CD2Q9Y426 696 aa23.25■■□□□ 1.31
NPAS3-201ENST00000346562 LOC102724159A0A0B4J2E5 919 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 SNRPB2P08579 225 aaKnown RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 HGFP14210 728 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 PWP2Q15269 919 aaKnown RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 CAMK1DQ8IU85 385 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 MAML3Q96JK9 1138 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 SNRNP25Q9BV90 132 aaKnown RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 MEGF6O75095 1541 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 RPL38P63173 70 aaKnown RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 BNC1Q01954 994 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 CBX2Q14781 532 aaPredicted RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 FLCNQ8NFG4 579 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ELL3Q9HB65 397 aaPredicted RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ARMCX1Q9P291 453 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 SERPINB7O75635 380 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 PGK1P00558 417 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 LPOP22079 712 aaPredicted RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ATP6V0D1P61421 351 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 NR1D2Q14995 579 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 C1orf186Q6ZWK4 172 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ZNF607Q96SK3 696 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ABCG4Q9H172 646 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 MBD2Q9UBB5 411 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 IKZF3Q9UKT9 509 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 MFHAS1Q9Y4C4 1052 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 GLUD1P00367 558 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 DEFB115Q30KQ5 88 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 MIIPQ5JXC2 388 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 COPS5Q92905 334 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ZNF354BQ96LW1 612 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 NUAK2Q9H093 628 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 CMTM6Q9NX76 183 aa23.24■■□□□ 1.31
NPAS3-201ENST00000346562 ZNF214Q9UL59 606 aaPredicted RBP23.24■■□□□ 1.31
NPAS3-201ENST00000346562 FFAR3O14843 346 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 GPR42O15529 346 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 ELFN1P0C7U0 828 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 GTF2BQ00403 316 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 C16orf46Q6P387 395 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 FOXR1Q6PIV2 292 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms