RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 TPI1P60174 286 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 RHOAP61586 193 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 TPM4P67936 248 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 PTK2BQ14289 1009 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 CDCP2Q5VXM1 449 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 ZCCHC8Q6NZY4 707 aaKnown RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 GDPD4Q6W3E5 623 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 PARGQ86W56 976 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 CASKIN2Q8WXE0 1202 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 DPH1Q9BZG8 443 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 DHX35Q9H5Z1 703 aaKnown RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 HAUS4Q9H6D7 363 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 NEU3Q9UQ49 428 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 URB1O60287 2271 aaKnown RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 SMG1Q96Q15 3661 aaKnown RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 APC2O95996 2303 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 MYLKQ15746 1914 aa12.58□□□□□ -0.39
SGCA-202ENST00000344627 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 TCRBV5S1A1TA0A578 114 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 TRIM38O00635 465 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 FPGTO14772 594 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 TLX3O43711 291 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 OPA1O60313 960 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 BRINP1O60477 761 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 TCEA3O75764 348 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 RNF8O76064 485 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 NME1P15531 152 aaKnown RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 ABL2P42684 1182 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 LSSP48449 732 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 SUOXP51687 545 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 CLDN6P56747 220 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 YBEYP58557 167 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 YPEL5P62699 121 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 RHDQ02161 417 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 OGDHQ02218 1023 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 PARP15Q460N3 678 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 LRRC73Q5JTD7 316 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 GCNT7Q6ZNI0 430 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 SDR16C5Q8N3Y7 309 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 PAF1Q8N7H5 531 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 BMFQ96LC9 184 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 FCRL3Q96P31 734 aaPredicted RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 KLC2Q9H0B6 622 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
SGCA-202ENST00000344627 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 DONSONQ9NYP3 566 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 MYO1AQ9UBC5 1043 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 AP4E1Q9UPM8 1137 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 ITM2BQ9Y287 266 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 CELSR3Q9NYQ7 3312 aa12.58□□□□□ -0.4
SGCA-202ENST00000344627 POM121BA6NF01 834 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 RAD51BO15315 384 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 PRPSAP2O60256 369 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 SKILP12757 684 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 TMPRSS3P57727 454 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 SERINC3Q13530 473 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 FGL2Q14314 439 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 CXorf40AQ8TE69 158 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 ZNF653Q96CK0 615 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 APOLD1Q96LR9 279 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 LGMNQ99538 433 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.57□□□□□ -0.4
SGCA-202ENST00000344627 TTYH3Q9C0H2 523 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 POLR1BQ9H9Y6 1135 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 UCKL1Q9NWZ5 548 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 CNOT8Q9UFF9 292 aaKnown RBP12.57□□□□□ -0.4
SGCA-202ENST00000344627 GGT7Q9UJ14 662 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 LOC400499M0QZD8 3231 aa12.57□□□□□ -0.4
SGCA-202ENST00000344627 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 A0A1W2PQC6 194 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 ARHGAP42A6NI28 874 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 TMX2-CTNND1H3BSU7 103 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms