RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SOX13Q9UN79 622 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 SLC27A6Q9Y2P4 619 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 C5P01031 1676 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 GJB5O95377 273 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 EIF2S1P05198 315 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 RHOP08100 348 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 NR6A1Q15406 480 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 CREG2Q8IUH2 290 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 EIF1ADQ8N9N8 165 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 THUMPD3Q9BV44 507 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 SNX5Q9Y5X3 404 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 HNRNPCL2B2RXH8 293 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 CCNCP24863 283 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 TERF2Q15554 542 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 ATP6AP1LQ52LC2 224 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 KLHL35Q6PF15 583 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 OR9Q1Q8NGQ5 310 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 COPS8Q99627 209 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 SH3GL1Q99961 368 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 KCTD5Q9NXV2 234 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 ARIH1Q9Y4X5 557 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 TRIM13O60858 407 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 POP4O95707 220 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 FAM107AO95990 144 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 JAM2P57087 298 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 ZNF366Q8N895 744 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 PHF21BQ96EK2 531 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 P2RY11Q96G91 374 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 NECTIN4Q96NY8 510 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 CCSER2Q9H7U1 834 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 PHTF1Q9UMS5 762 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 ZNF623O75123 536 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 SLC35G4P0C7Q5 338 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 ZSCAN5DPP0CG00 497 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 CRYBG2Q8N1P7 616 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 AGGF1Q8N302 714 aaeCLIP16.53■□□□□ 0.244e-6■■■■□ 20.3
SMARCA4-201ENST00000344626 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 CERS2Q96G23 380 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 KCTD15Q96SI1 283 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 WRAP53Q9BUR4 548 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 PARVBQ9HBI1 364 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 VTI1BQ9UEU0 232 aa16.53■□□□□ 0.24
SMARCA4-201ENST00000344626 MTMR11A4FU01 709 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 SCAMP1O15126 338 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 VPS4BO75351 444 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 THRAP10827 490 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 LSP1P33241 339 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 GPR15P49685 360 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 PGS1Q32NB8 556 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 RBFAQ8N0V3 343 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 GDAP2Q9NXN4 497 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 NUP98P52948 1817 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 RPS24P62847 133 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 AUHQ13825 339 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 GALNT3Q14435 633 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 TEX44Q53QW1 395 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 TMEM40Q8WWA1 233 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 ACDQ96AP0 544 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 ERP27Q96DN0 273 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 APOPT1Q96IL0 206 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 MRPL46Q9H2W6 279 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 ZNF576Q9H609 170 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 CHKBQ9Y259 395 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 H0Y3Z8 333 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 IRAK2O43187 625 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 CFHP08603 1231 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 ADH5P11766 374 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 RNF19BQ6ZMZ0 732 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 STARD8Q92502 1023 aa16.52■□□□□ 0.24
SMARCA4-201ENST00000344626 VNN1O95497 513 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 SERPINE1P05121 402 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 LTA4HP09960 611 aaKnown RBP16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 OCM2P0CE71 109 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 OCMP0CE72 109 aaPredicted RBP16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 PBX1P40424 430 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 KRT78Q8N1N4 520 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 HDDC3Q8N4P3 179 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 TFAP2BQ92481 460 aa16.52■□□□□ 0.23
SMARCA4-201ENST00000344626 ANKDD1BA6NHY2 528 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 IFNA14P01570 189 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 SLC2A4P14672 509 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 AP1S1P61966 158 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 HLA-DQA1Q5Y7H0 255 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 ZFYVE1Q9HBF4 777 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 NOP53Q9NZM5 478 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 CA14Q9ULX7 337 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 PADI4Q9UM07 663 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 NOMO1Q15155 1222 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 ITPRIPL2Q3MIP1 535 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 TMC3Q7Z5M5 1100 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 TAF8Q7Z7C8 310 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 KRCC1Q9NPI7 259 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 GDF3Q9NR23 364 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms