RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF358Q9NW07 568 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 SEPT3Q9UH03 358 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 VPS28Q9UK41 221 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CHKBQ9Y259 395 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 COPEO14579 308 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 LDB2O43679 373 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 TMCC1O94876 653 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 AHSGP02765 367 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 SERPINB9P50453 376 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CDK18Q07002 472 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 GPM6BQ13491 265 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CDH18Q13634 790 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 FRG1Q14331 258 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 C16orf46Q6P387 395 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 TIFABQ6ZNK6 161 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PIGWQ7Z7B1 504 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 MFN1Q8IWA4 741 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 MFSD6LQ8IWD5 586 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PPHLN1Q8NEY8 458 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 ALKBH8Q96BT7 664 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CPNE1Q99829 537 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 ARHGAP26Q9UNA1 814 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 OR51F1A6NGY5 319 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 INSIG1O15503 277 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ZWINTO95229 277 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 IL9RQ01113 521 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 LMAN2Q12907 356 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 PRSS36Q5K4E3 855 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ATXN7L2Q5T6C5 722 aaPredicted RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 LGSNQ5TDP6 509 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 FYB2Q5VWT5 728 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 OR6K2Q8NGY2 324 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 MTBPQ96DY7 904 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 THOC1Q96FV9 657 aaKnown RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 LRRC3BQ96PB8 259 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 LHX3Q9UBR4 397 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 LSM7Q9UK45 103 aaKnown RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 EMCNQ9ULC0 261 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 PLLPQ9Y342 182 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ARL5AQ9Y689 179 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 AP3B1O00203 1094 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 GSRP00390 522 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 SERPINF2P08697 491 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 AVPR1AP37288 418 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 LIMK2P53671 638 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 GRM3Q14832 879 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 PDK4Q16654 411 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 LDB1Q86U70 411 aaPredicted RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 ARMC2Q8NEN0 867 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 SUDS3Q9H7L9 328 aaPredicted RBP13.7□□□□□ -0.22
CDC42-202ENST00000344548 RWDD3Q9Y3V2 267 aa13.7□□□□□ -0.22
CDC42-202ENST00000344548 ANKRD36A6QL64 1941 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 HELZP42694 1942 aaKnown RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 MROH6A6NGR9 719 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TRIM24O15164 1050 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TM9SF1O15321 606 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 RB1P06400 928 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 CEBPBP17676 345 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 GKP32189 559 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 SLC8A1P32418 973 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 CTSOP43234 321 aaPredicted RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 IRX4P78413 519 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 IRF9Q00978 393 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 GRTP1Q5TC63 336 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 ZC3HC1Q86WB0 502 aaKnown RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 ZNF75CPQ92670 426 aaPredicted RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 PPP1R2P1Q96PQ5 205 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TM6SF2Q9BZW4 377 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TXNDC16Q9P2K2 825 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 RFXAPO00287 272 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 HLA-FP30511 346 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 SLC1A2P43004 574 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 ERVK-21P61565 698 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms