RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PTAR1Q7Z6K3 402 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-201ENST00000344376 GATAD2AQ86YP4 633 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 DCP2Q8IU60 420 aaKnown RBP16.26■□□□□ 0.19
ATG4B-201ENST00000344376 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 ATPAF2Q8N5M1 289 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 PAF1Q8N7H5 531 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 SAP25Q8TEE9 199 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 ASB12Q8WXK4 309 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 C1QTNF7Q9BXJ2 289 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 NHEJ1Q9H9Q4 299 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-201ENST00000344376 ITM2BQ9Y287 266 aa16.26■□□□□ 0.19
ATG4B-201ENST00000344376 IGLON5A6NGN9 336 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 FPGTO14772 594 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 AREL1O15033 823 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 INSIG1O15503 277 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 TNFSF14O43557 240 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 HYAL3O43820 417 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-201ENST00000344376 PIGNO95427 931 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 PAK4O96013 591 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-201ENST00000344376 KRT7P08729 469 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 CLDN2P57739 230 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 ZNF235Q14590 738 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 SHBQ15464 509 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 ERAP2Q6P179 960 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 BRAT1Q6PJG6 821 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
ATG4B-201ENST00000344376 GCNT7Q6ZNI0 430 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 ARHGAP36Q6ZRI8 547 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 ABI3BPQ7Z7G0 1075 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 SRLQ86TD4 932 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 MAP7D3Q8IWC1 876 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
ATG4B-201ENST00000344376 DENND6BQ8NEG7 585 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 OR13H1Q8NG92 308 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 TSC1Q92574 1164 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 VOPP1Q96AW1 172 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 LENG8Q96PV6 779 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-201ENST00000344376 SCNM1Q9BWG6 230 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 C1QTNF2Q9BXJ5 285 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 ETNK2Q9NVF9 386 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 GGT7Q9UJ14 662 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 WASF3Q9UPY6 502 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 NEUROG3Q9Y4Z2 214 aa16.25■□□□□ 0.19
ATG4B-201ENST00000344376 TSPAN11A1L157 253 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 TIMP2P16035 220 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 SPINK2P20155 84 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 MAN1A1P33908 653 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 HSPA9P38646 679 aaKnown RBP16.24■□□□□ 0.19
ATG4B-201ENST00000344376 RABIFP47224 123 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 NSUN2Q08J23 767 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATG4B-201ENST00000344376 FGL2Q14314 439 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 LBRQ14739 615 aaKnown RBP16.24■□□□□ 0.19
ATG4B-201ENST00000344376 LRRC73Q5JTD7 316 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 ZFYVE27Q5T4F4 411 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 Q6ZSR6 202 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 KCTD6Q8NC69 237 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 ADAMTS14Q8WXS8 1223 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 CHP1Q99653 195 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 KLHL11Q9NVR0 708 aa16.24■□□□□ 0.19
ATG4B-201ENST00000344376 TMEM131Q92545 1883 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 PCNX2A6NKB5 2137 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 GOLGA8CPA6NN73 597 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 SPINT1O43278 529 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 TM7SF2O76062 418 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
ATG4B-201ENST00000344376 AP1S1P61966 158 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 BCL2L1Q07817 233 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 PDK2Q15119 407 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 RAB44Q7Z6P3 723 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-201ENST00000344376 CAMK1DQ8IU85 385 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 LRRC49Q8IUZ0 686 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 RHOT2Q8IXI1 618 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 CHCHD4Q8N4Q1 142 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 IFT43Q96FT9 208 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 PSKH2Q96QS6 385 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 ZNF670Q9BS34 389 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 SPTLC3Q9NUV7 552 aa16.23■□□□□ 0.19
ATG4B-201ENST00000344376 TMEM110-MUSTN1A8MSY1 372 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 MMP20O60882 483 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 LDOC1O95751 146 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-201ENST00000344376 ATXN1LP0C7T5 689 aaKnown RBP16.22■□□□□ 0.19
ATG4B-201ENST00000344376 RGRP47804 291 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 SCNN1BP51168 640 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 DPYSL3Q14195 570 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 UGP2Q16851 508 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 HS1BP3Q53T59 392 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 TP53INP2Q8IXH6 220 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 EID2Q8N6I1 236 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 PNPLA1Q8N8W4 532 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 FAM71BQ8TC56 605 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 CNDP2Q96KP4 475 aaKnown RBP16.22■□□□□ 0.19
ATG4B-201ENST00000344376 WRAP53Q9BUR4 548 aaKnown RBP16.22■□□□□ 0.19
ATG4B-201ENST00000344376 KNL1Q8NG31 2342 aa16.22■□□□□ 0.19
ATG4B-201ENST00000344376 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-201ENST00000344376 RAD51BO15315 384 aa16.21■□□□□ 0.19
ATG4B-201ENST00000344376 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-201ENST00000344376 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms