RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ALDH9A1P49189 494 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 CDH13P55290 713 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 GALNT3Q14435 633 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 CACUL1Q86Y37 369 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 KBTBD2Q8IY47 623 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PLD5Q8N7P1 536 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 ITFG1Q8TB96 612 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 OSCP1Q8WVF1 389 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 CSPG4P5Q96PW8 444 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-202ENST00000343090 NPAS2Q99743 824 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 RRAGCQ9HB90 399 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PNPLA3Q9NST1 481 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM59LQ9UK28 342 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 ABCC6O95255 1503 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PLSCR1O15162 318 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 MSI1O43347 362 aaKnown RBP8.13□□□□□ -1.11
UBE4B-202ENST00000343090 IDH3BO43837 385 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 CILPO75339 1184 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 OR6B1O95007 311 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 CYP1A1P04798 512 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-202ENST00000343090 ZNF7P17097 686 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-202ENST00000343090 BRCC3P46736 316 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 KPNA1P52294 538 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-202ENST00000343090 ADAM17P78536 824 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 LSAMPQ13449 338 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 DDR2Q16832 855 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 C9orf57Q5W0N0 161 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM53Q6P2H8 277 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PRMT9Q6P2P2 845 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 TPGS1Q6ZTW0 290 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 NUDT18Q6ZVK8 323 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 OTOP3Q7RTS5 596 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 HPS6Q86YV9 775 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 DHRSXQ8N5I4 330 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 DGCR6LQ9BY27 220 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 TRIM39Q9HCM9 518 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 DMAC2Q9NW81 257 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PADI4Q9UM07 663 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 STXBP5LQ9Y2K9 1186 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 PLLPQ9Y342 182 aa8.13□□□□□ -1.11
UBE4B-202ENST00000343090 RGSL1A5PLK6 1076 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 NPM3O75607 178 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 WASHC5Q12768 1159 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 PPIL2Q13356 520 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 RNASEH2BQ5TBB1 312 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 PMF1Q6P1K2 205 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SCAIQ8N9R8 606 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SEMA3CQ99985 751 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 CLK4Q9HAZ1 481 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 KLQ9UEF7 1012 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 ADAM28Q9UKQ2 775 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 RAB26Q9ULW5 256 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SORCS3Q9UPU3 1222 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 TMED5Q9Y3A6 229 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 NR2E3Q9Y5X4 410 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 GPR25O00155 361 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 HDAC3O15379 428 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 BIRC5O15392 142 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SNRPB2P08579 225 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 CFHP08603 1231 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 GSTM1P09488 218 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 LINC00032P0C843 101 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 LBPP18428 481 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 PIK3R1P27986 724 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 GRM5P41594 1212 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 NRLP54845 237 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 CNTN1Q12860 1018 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 MSLNQ13421 630 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SH3PXD2AQ5TCZ1 1133 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DET1Q7L5Y6 550 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DLG3Q92796 817 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 YME1L1Q96TA2 773 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 OSGEPL1Q9H4B0 414 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DPEP3Q9H4B8 488 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DYRK1BQ9Y463 629 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM114B3SHH9 223 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 ATG7O95352 703 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 EIF2S1P05198 315 aaKnown RBP8.12□□□□□ -1.11
UBE4B-202ENST00000343090 TTKP33981 857 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 IL2P60568 153 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SPIDRQ14159 915 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 TBC1D25Q3MII6 688 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 RETSATQ6NUM9 610 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 SYTL1Q8IYJ3 562 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 DAW1Q8N136 415 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 STX19Q8N4C7 294 aa8.12□□□□□ -1.11
UBE4B-202ENST00000343090 FNIP1Q8TF40 1166 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms