RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 RAD23AP54725 363 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 TMBIM6P55061 237 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 MRPS5P82675 430 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 POU6F1Q14863 301 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PIGGQ5H8A4 983 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 IQSEC1Q6DN90 963 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 KCTD8Q6ZWB6 473 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 ADAMTSL2Q86TH1 951 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 TFAP2CQ92754 450 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 SLC13A1Q9BZW2 595 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 WDR12Q9GZL7 423 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 FZD8Q9H461 694 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 HMG20AQ9NP66 347 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 COMMD8Q9NX08 183 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 STMN3Q9NZ72 180 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 UBA2Q9UBT2 640 aaPredicted RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 POLHQ9Y253 713 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 TESMINQ9Y4I5 508 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 ACKR2O00590 384 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 COPEO14579 308 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 NOL3O60936 208 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 IL18RAPO95256 599 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PTGS2P35354 604 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PTPN9P43378 593 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 MLLT6P55198 1093 aaPredicted RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 ENPEPQ07075 957 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 CDC20Q12834 499 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 GPS1Q13098 491 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 FAM205BPQ63HN1 556 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PDPK2PQ6A1A2 396 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 MPZL3Q6UWV2 235 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 SCARA5Q6ZMJ2 495 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 UNC5AQ6ZN44 842 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PRR23BQ6ZRT6 265 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PIWIL3Q7Z3Z3 882 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PDCD6IPQ8WUM4 868 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 RTKNQ9BST9 563 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PTPRHQ9HD43 1115 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 GIMAP4Q9NUV9 329 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 EIF3LQ9Y262 564 aaKnown RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 PLLPQ9Y342 182 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 TCAF1Q9Y4C2 921 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 DOCK3Q8IZD9 2030 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 H3BRB1 525 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 GAS2O43903 313 aaKnown RBP11.96□□□□□ -0.49
RTN3-203ENST00000341307 UGT2B4P06133 528 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 HOXC6P09630 235 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 WEE2P0C1S8 567 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 PROZP22891 400 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 GNA15P30679 374 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 SERPINB1P30740 379 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 CLCNKBP51801 687 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 DSTNP60981 165 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 CEACAM7Q14002 265 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 NEDD8Q15843 81 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 WDR49Q8IV35 697 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 SLC4A11Q8NBS3 891 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 PPTC7Q8NI37 304 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 RASSF5Q8WWW0 418 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 DLG3Q92796 817 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 CNDP2Q96KP4 475 aaKnown RBP11.96□□□□□ -0.49
RTN3-203ENST00000341307 UQCC2Q9BRT2 126 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 C2orf40Q9H1Z8 148 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 CDT1Q9H211 546 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 GPN2Q9H9Y4 310 aaPredicted RBP11.96□□□□□ -0.49
RTN3-203ENST00000341307 MORF4L1Q9UBU8 362 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 PSME2Q9UL46 239 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 PRPF19Q9UMS4 504 aaKnown RBP11.96□□□□□ -0.49
RTN3-203ENST00000341307 GABRQQ9UN88 632 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 MGAMO43451 1857 aa11.96□□□□□ -0.49
RTN3-203ENST00000341307 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 FADS2P1A8MWK0 482 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 RNF103O00237 685 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 SNPHO15079 494 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 LYPLA1O75608 230 aaPredicted RBP11.96□□□□□ -0.5
RTN3-203ENST00000341307 NADKO95544 446 aaPredicted RBP11.96□□□□□ -0.5
RTN3-203ENST00000341307 CFL1P23528 166 aaKnown RBP11.96□□□□□ -0.5
RTN3-203ENST00000341307 ARSEP51690 589 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 GBE1Q04446 702 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 GRB14Q14449 540 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 FNBP1LQ5T0N5 605 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 ARMC8Q8IUR7 673 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 ZFP90Q8TF47 636 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.5
RTN3-203ENST00000341307 LRTOMTQ8WZ04 291 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 CDRT15Q96T59 188 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 MTG1Q9BT17 334 aaPredicted RBP11.96□□□□□ -0.5
RTN3-203ENST00000341307 RAD21L1Q9H4I0 556 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 ATP13A2Q9NQ11 1180 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms