RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RACK1P63244 317 aaKnown RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 SLC10A7Q0GE19 358 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 PAFAH1B3Q15102 231 aaKnown RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 ANKRD20A8PQ5CZ79 823 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 NCBP2-AS2Q69YL0 99 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 NEK5Q6P3R8 708 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 GDPD4Q6W3E5 623 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 RAD9BQ6WBX8 426 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 PROSER1Q86XN7 944 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 PQLC3Q8N755 202 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 KCTD6Q8NC69 237 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 KLHL32Q96NJ5 620 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 CALN1Q9BXU9 219 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 OSBPL1AQ9BXW6 950 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 CPEB1Q9BZB8 566 aaKnown RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 IL21RQ9HBE5 538 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 ZFR2Q9UPR6 939 aaKnown RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 FADS3Q9Y5Q0 445 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 SPEGQ15772 3267 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 ANKRD36A6QL64 1941 aa15.58■□□□□ 0.09
VAPA-201ENST00000340541 TRPM6Q9BX84 2022 aa15.58■□□□□ 0.09
VAPA-201ENST00000340541 CABIN1Q9Y6J0 2220 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 A0A1W2PQU0 124 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 A0A1W2PR77 199 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 RCCD1A6NED2 376 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 AP1G1O43747 822 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 MFSD11O43934 449 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 PCDHGA12O60330 932 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 BUB1BO60566 1050 aaPredicted RBP15.58■□□□□ 0.08
VAPA-201ENST00000340541 PALMO75781 387 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 KDELR1P24390 212 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 MAT2AP31153 395 aaKnown RBP15.58■□□□□ 0.08
VAPA-201ENST00000340541 SERPINB6P35237 376 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 CSNK1DP48730 415 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 CCDC15Q0P6D6 951 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 RFTN1Q14699 578 aaPredicted RBP15.58■□□□□ 0.08
VAPA-201ENST00000340541 KIF19Q2TAC6 998 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 ZNF284Q2VY69 593 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 TMEM259Q4ZIN3 620 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 LRRC38Q5VT99 294 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 FBXL19Q6PCT2 694 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 SLCO6A1Q86UG4 719 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 HORMAD1Q86X24 394 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 RHBDD1Q8TEB9 315 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 NSMCE3Q96MG7 304 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 ZNF599Q96NL3 588 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 PSKH2Q96QS6 385 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 ANKRD6Q9Y2G4 727 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
VAPA-201ENST00000340541 HYOU1Q9Y4L1 999 aa15.58■□□□□ 0.08
VAPA-201ENST00000340541 PKD1L2Q7Z442 2459 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
VAPA-201ENST00000340541 TSPAN11A1L157 253 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 TAF4O00268 1085 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 AREL1O15033 823 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 VILLO15195 856 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 PIGNO95427 931 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 COMTP21964 271 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 NUDT1P36639 197 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 SLC1A1P43005 524 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 CTSKP43235 329 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 GALNT2Q10471 571 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 LBRQ14739 615 aaKnown RBP15.57■□□□□ 0.08
VAPA-201ENST00000340541 SPA17Q15506 151 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 TMCO4Q5TGY1 634 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 NAPEPLDQ6IQ20 393 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 TMPRSS7Q7RTY8 843 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 PRPF39Q86UA1 669 aaKnown RBP15.57■□□□□ 0.08
VAPA-201ENST00000340541 MAP7D3Q8IWC1 876 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 PNPLA1Q8N8W4 532 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 SKA1Q96BD8 255 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 SERAC1Q96JX3 654 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 GOLPH3Q9H4A6 298 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 DKK3Q9UBP4 350 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 DMTF1Q9Y222 760 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 ITM2BQ9Y287 266 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 SNX11Q9Y5W9 270 aa15.57■□□□□ 0.08
VAPA-201ENST00000340541 WDFY3Q8IZQ1 3526 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 DSPP15924 2871 aaKnown RBP15.56■□□□□ 0.08
VAPA-201ENST00000340541 LRRD1A4D1F6 860 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 ZNF487B1APH4 448 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 TIMP2P16035 220 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 CR2P20023 1033 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 GRK6P43250 576 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 RAD51Q06609 339 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 NSUN2Q08J23 767 aaKnown RBP eCLIP15.56■□□□□ 0.08
VAPA-201ENST00000340541 FGL2Q14314 439 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 SETMARQ53H47 684 aaPredicted RBP15.56■□□□□ 0.08
VAPA-201ENST00000340541 SRLQ86TD4 932 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 ZSWIM9Q86XI8 627 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 VSIG1Q86XK7 387 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 GALNT15Q8N3T1 639 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 PGBD5Q8N414 524 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 ATPAF2Q8N5M1 289 aa15.56■□□□□ 0.08
VAPA-201ENST00000340541 SPC24Q8NBT2 197 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms