RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 FSCBQ5H9T9 825 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 IZUMO2Q6UXV1 221 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 PNPLA1Q8N8W4 532 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 PPHLN1Q8NEY8 458 aaKnown RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 NXNL1Q96CM4 212 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 LENG8Q96PV6 779 aaPredicted RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 FSD1LQ9BXM9 530 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 NUF2Q9BZD4 464 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 XPR1Q9UBH6 696 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 ALPK3Q96L96 1907 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 MATN3O15232 486 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ANXA9O76027 345 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 NEBLO76041 1014 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 SLC1A2P43004 574 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 MRPS35P82673 323 aaKnown RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 TSPY1Q01534 308 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 SLC12A1Q13621 1099 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 LRRC36Q1X8D7 754 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 LRRC8EQ6NSJ5 796 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 SCD5Q86SK9 330 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 C7orf61Q8IZ16 206 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 BCL7CQ8WUZ0 217 aaPredicted RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 SGF29Q96ES7 293 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 HAPLN3Q96S86 360 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 DRC3Q9H069 523 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 CATSPERBQ9H7T0 1116 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 NSMCE4AQ9NXX6 385 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 DONSONQ9NYP3 566 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ZDHHC2Q9UIJ5 367 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ANKRD6Q9Y2G4 727 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 COL4A4P53420 1690 aaPredicted RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 PATJQ8NI35 1801 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 A0A1W2PQH9 124 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 AP3B1O00203 1094 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 EFCAB14O75071 495 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 OAZ2O95190 189 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 NUMBP49757 651 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 PSEN1P49768 467 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 CSRP3P50461 194 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 PAPOLAP51003 745 aaKnown RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 CCNIQ14094 377 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 BRMS1LQ5PSV4 323 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 VARS2Q5ST30 1063 aaKnown RBP16.48■□□□□ 0.23
LITAF-201ENST00000339430 ZNF280DQ6N043 979 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ACTRT2Q8TDY3 377 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 CWH43Q9H720 699 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 GPAMQ9HCL2 828 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 S100A14Q9HCY8 104 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 SSX2IPQ9Y2D8 614 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 ACOT9Q9Y305 439 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
LITAF-201ENST00000339430 COL4A6Q14031 1691 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 E9PAM4 449 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 MATN2O00339 956 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 AURKAO14965 403 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 SYN3O14994 580 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 CCNT2O60583 730 aaKnown RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 H2AFYO75367 372 aaKnown RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 JUNP05412 331 aaKnown RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 APOA4P06727 396 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ARCN1P48444 511 aaKnown RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 RPL14P50914 215 aaKnown RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 ZNF33AQ06730 810 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 DLG1Q12959 904 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 SLC39A12Q504Y0 691 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ARTNQ5T4W7 220 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 TMCO4Q5TGY1 634 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 MANEALQ5VSG8 457 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 SEL1L3Q68CR1 1132 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ZNF470Q6ECI4 717 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 IRGCQ6NXR0 463 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 FUT10Q6P4F1 479 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 ELMO2Q96JJ3 720 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 MARK4Q96L34 752 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 SMOC2Q9H3U7 446 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 OSER1Q9NX31 292 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ABI2Q9NYB9 513 aaPredicted RBP16.47■□□□□ 0.23
LITAF-201ENST00000339430 MID2Q9UJV3 735 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 ARHGAP26Q9UNA1 814 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 TCAF1Q9Y4C2 921 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 HS3ST4Q9Y661 456 aa16.47■□□□□ 0.23
LITAF-201ENST00000339430 AIM2O14862 343 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 FKBP6O75344 327 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 STMN1P16949 149 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 GLDCP23378 1020 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 HADHAP40939 763 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 GEMP55040 296 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 RAB10P61026 200 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 LSM12Q3MHD2 195 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms