RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SLC8A1P32418 973 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 MAGEA9P43362 315 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 MAPKAPK2P49137 400 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 EPHB3P54753 998 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 CDH4P55283 916 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 YBEYP58557 167 aaPredicted RBP7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 KCNJ2P63252 427 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 ARF5P84085 180 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 DLG1Q12959 904 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF235Q14590 738 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 USP10Q14694 798 aaKnown RBP7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 VEPH1Q14D04 833 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 CYTH1Q15438 398 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 EML3Q32P44 896 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 LACTB2Q53H82 288 aaPredicted RBP7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 KLHDC10Q6PID8 442 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 NLRP9Q7RTR0 991 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 ARID3BQ8IVW6 561 aaPredicted RBP7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 TMEM151AQ8N4L1 468 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 PPHLN1Q8NEY8 458 aaKnown RBP7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 OR6K2Q8NGY2 324 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 NAT14Q8WUY8 206 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 TADA1Q96BN2 335 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 TMEM237Q96Q45 408 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 MUC3BQ9H195 1237 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 ARNT2Q9HBZ2 717 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 SLC12A4Q9UP95 1085 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 GPR39O43194 453 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PRLP01236 227 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 SLC35E2BP0CK96 405 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 T-ENOLP0DO92 83 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 CTSAP10619 480 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 MYL2P10916 166 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 SP100P23497 879 aaPredicted RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 CNTFP26441 200 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 TARSP26639 723 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 GKP32189 559 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 RFC2P35250 354 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 IRS1P35568 1242 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 KPNA1P52294 538 aaPredicted RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF177Q13360 481 aaPredicted RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 ITGA9Q13797 1035 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 MIA3Q5JRA6 1907 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PLPP4Q5VZY2 271 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 MBLAC2Q68D91 279 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 RNF43Q68DV7 783 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PDPK2PQ6A1A2 396 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 NEPROQ6NW34 567 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 LILRA6Q6PI73 481 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 RAPH1Q70E73 1250 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 TBC1D1Q86TI0 1168 aaPredicted RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 ALYREFQ86V81 257 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PACS2Q86VP3 889 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 BBS7Q8IWZ6 715 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 APCDD1Q8J025 514 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 GPATCH11Q8N954 259 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PDZD8Q8NEN9 1154 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 AGR3Q8TD06 166 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 CHD5Q8TDI0 1954 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 KCTD4Q8WVF5 259 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 TRMT2BQ96GJ1 504 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 DNAJC1Q96KC8 554 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 OMDQ99983 421 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 TCF25Q9BQ70 676 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 EBF4Q9BQW3 602 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 CORO1BQ9BR76 489 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 LRRC3Q9BY71 257 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 POLR1EQ9GZS1 481 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 RXFP1Q9HBX9 757 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 IL23AQ9NPF7 189 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 HEY2Q9UBP5 337 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 FNDC3AQ9Y2H6 1198 aaKnown RBP7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 CRYL1Q9Y2S2 319 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 PCDHB12Q9Y5F1 795 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 SPO11Q9Y5K1 396 aa7.46□□□□□ -1.21
SRFBP1-201ENST00000339397 LTBP2Q14767 1821 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 GRXCR1A8MXD5 290 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 H0Y626 953 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 PER2O15055 1255 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 PSMD3O43242 534 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 SMAD6O43541 496 aaKnown RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FSBPO95073 299 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 PRAMEF12O95522 483 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FGBP02675 491 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 CKMP06732 381 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 C8AP07357 584 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 RHOCP08134 193 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 MYL4P12829 197 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 SERPINB3P29508 390 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 MAGEA12P43365 314 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 CDKN1CP49918 316 aaPredicted RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TAS2R39P59534 338 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 NCALDP61601 193 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 OCRLQ01968 901 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 CDK18Q07002 472 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms