RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 SLC36A4Q6YBV0 504 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 ZSWIM9Q86XI8 627 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 OR14C36Q8NHC7 312 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 TEKT5Q96M29 485 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 ZNF641Q96N77 438 aaPredicted RBP16.9■□□□□ 0.3
SFN-201ENST00000339276 SGK2Q9HBY8 427 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 HAUS2Q9NVX0 235 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 THADAQ6YHU6 1953 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
SFN-201ENST00000339276 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 FAM47DPA6NHR8 397 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 ZNF185O15231 689 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 SLC7A4O43246 635 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 PLRG1O43660 514 aaKnown RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 LIASO43766 372 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 MMP2P08253 660 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 ADRB3P13945 408 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 CD68P34810 354 aaPredicted RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 CD86P42081 329 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 ABL2P42684 1182 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 SNX1Q13596 522 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 CFAP58Q5T655 872 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 PAPD7Q5XG87 772 aaKnown RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 PMS2CLQ68D20 193 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 FBXL19Q6PCT2 694 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 ARMCX6Q7L4S7 300 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 ZC3H10Q96K80 434 aaKnown RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 PHOX2BQ99453 314 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 C6orf106Q9H6K1 298 aaPredicted RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 USP29Q9HBJ7 922 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 GLOD4Q9HC38 313 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 KLHL8Q9P2G9 620 aaPredicted RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 DKK3Q9UBP4 350 aa16.89■□□□□ 0.29
SFN-201ENST00000339276 SMG5Q9UPR3 1016 aaKnown RBP16.89■□□□□ 0.29
SFN-201ENST00000339276 TNRC6BQ9UPQ9 1833 aaKnown RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 CTAGE9A4FU28 777 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 SPINT1O43278 529 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 SOCS5O75159 536 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 NFKB1P19838 968 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 CES1P23141 567 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 SKOR1P84550 965 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 OASLQ15646 514 aaKnown RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 ELF2Q15723 593 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 LPCAT2Q7L5N7 544 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 PDCD6IPQ8WUM4 868 aaKnown RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 NKD2Q969F2 451 aaPredicted RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 RBM15Q96T37 977 aaKnown RBP eCLIP16.88■□□□□ 0.29
SFN-201ENST00000339276 VAT1Q99536 393 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 TMEM121Q9BTD3 319 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 FRMD8P1Q9BZ68 369 aaPredicted RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
SFN-201ENST00000339276 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
SFN-201ENST00000339276 PGRMC1O00264 195 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 CES2O00748 559 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 HTRA2O43464 458 aaPredicted RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 PRKCGP05129 697 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 SERPINF2P08697 491 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TIMP2P16035 220 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 ITIH2P19823 946 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 PTGER3P43115 390 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 DHPSP49366 369 aaPredicted RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 GDF10P55107 478 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 ETF1P62495 437 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 PPP2CBP62714 309 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 PPP2CAP67775 309 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 CCDC15Q0P6D6 951 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 BRAT1Q6PJG6 821 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 NYAP1Q6ZVC0 841 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 PID1Q7Z2X4 250 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TTC7BQ86TV6 843 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 PRPF39Q86UA1 669 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 PAF1Q8N7H5 531 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 FAM71DQ8N9W8 422 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 SUMF1Q8NBK3 374 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 OR2T34Q8NGX1 318 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 SPATA22Q8NHS9 363 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 CCDC110Q8TBZ0 833 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 HCAR2Q8TDS4 363 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 IMP4Q96G21 291 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 HSPA12BQ96MM6 686 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TDRD1Q9BXT4 1180 aaKnown RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 SLC25A51Q9H1U9 297 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 GGT7Q9UJ14 662 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TRHDEQ9UKU6 1024 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 ARIH1Q9Y4X5 557 aaPredicted RBP16.87■□□□□ 0.29
SFN-201ENST00000339276 RAI2Q9Y5P3 530 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 FADS3Q9Y5Q0 445 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms