RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RNF208Q9H0X6 261 aa5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 LRMDAQ9H2I8 198 aa5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 ASIC5Q9NY37 505 aa5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 HACD3Q9P035 362 aa5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 CXXC1Q9P0U4 656 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 IPO11Q9UI26 975 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-201ENST00000337659 LINC01553A4QN01 128 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 NDST3O95803 873 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 S1PR4O95977 384 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 FGF4P08620 206 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 BRAFP15056 766 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 AOC1P19801 751 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 GLDCP23378 1020 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PRPH2P23942 346 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PTK2BQ14289 1009 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PRPSAP1Q14558 356 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 UGP2Q16851 508 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SIRPB2Q5JXA9 342 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PRSS55Q6UWB4 352 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 GDPD4Q6W3E5 623 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ATAD1Q8NBU5 361 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 WBP2Q969T9 261 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 DUS3LQ96G46 650 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 VPS35Q96QK1 796 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 DZANK1Q9NVP4 752 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 OXSMQ9NWU1 459 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SFMBT1Q9UHJ3 866 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 RSPH14Q9UHP6 348 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LRFN2Q9ULH4 789 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ARL2BPQ9Y2Y0 163 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 TICRRQ7Z2Z1 1910 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 BANF1O75531 89 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ATP5HO75947 161 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 TSPAN12O95859 305 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CNPP09543 421 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MGAT1P26572 445 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 EPHB2P29323 1055 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SLC11A2P49281 568 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ALDH7A1P49419 539 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SERPINH1P50454 418 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 IL9RQ01113 521 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 TECRLQ5HYJ1 363 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 TJAP1Q5JTD0 557 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LYPLAL1Q5VWZ2 237 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ZC3H18Q86VM9 953 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 FBXO15Q8NCQ5 510 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 RIN3Q8TB24 985 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 DEPDC1BQ8WUY9 529 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ZNF641Q96N77 438 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CCDC106Q9BWC9 280 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 POLR1EQ9GZS1 481 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 EPHX3Q9H6B9 360 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MRPL17Q9NRX2 175 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PLA2G4CQ9UP65 541 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ZFP37Q9Y6Q3 630 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 NUMBLQ9Y6R0 609 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 COL5A1P20908 1838 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CCT8L1PA6NM43 557 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PSMD11O00231 422 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MGRN1O60291 552 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 AVILO75366 819 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ACSL3O95573 720 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 T-ENOLP0DO92 83 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 GGT5P36269 586 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CLCN2P51788 898 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CDR1P51861 262 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ZNF33BQ06732 778 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 FCHO2Q0JRZ9 810 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LGSNQ5TDP6 509 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 DNAJB7Q7Z6W7 309 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CARNMT1Q8N4J0 409 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PDCD7Q8N8D1 485 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 VN1R2Q8NFZ6 395 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SHKBP1Q8TBC3 707 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 CALML6Q8TD86 181 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 EDEM1Q92611 657 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 USP13Q92995 863 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 FAM118BQ9BPY3 351 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 RDH14Q9HBH5 336 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SLC52A3Q9NQ40 469 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 TMEM39AQ9NV64 488 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 INTS9Q9NV88 658 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SIRT5Q9NXA8 310 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SEPT3Q9UH03 358 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 PIM1P11309 404 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 ARRB2P32121 409 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MSH2P43246 934 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 IFRD2Q12894 506 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 DUSP4Q13115 394 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MPPE1Q53F39 396 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 RNF187Q5TA31 235 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LEKR1Q6ZMV7 388 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 SUGP1Q8IWZ8 645 aaKnown RBP5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 KCNV2Q8TDN2 545 aa5.41□□□□□ -1.54
PRPF4B-201ENST00000337659 LPGAT1Q92604 370 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms