RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 B2RBV5 119 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 TK2O00142 265 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ADAM12O43184 909 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ACSL4O60488 711 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 AOC1P19801 751 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ACVRL1P37023 503 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 SLC11A2P49281 568 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 KPNA2P52292 529 aaKnown RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 SLC12A2P55011 1212 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF235Q14590 738 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 CFAP157Q5JU67 520 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 SIRPB2Q5JXA9 342 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 RABGAP1LQ5R372 815 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 MFSD6LQ8IWD5 586 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 CENPLQ8N0S6 344 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 MYEOVQ96EZ4 313 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF512Q96ME7 567 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF599Q96NL3 588 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 GATA5Q9BWX5 397 aaPredicted RBP16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 HIPK3Q9H422 1215 aa16.83■□□□□ 0.28
TMEM39B-201ENST00000336294 LOC285095A0A1B0GVY8 99 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 PRR5-ARHGAP8B1AHC4 643 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF195O14628 629 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 EFEMP2O95967 443 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 OR1D2P34982 312 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 CCL23P55773 120 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ARHGAP8P85298 464 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 MSLNQ13421 630 aaPredicted RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 UBAP2LQ14157 1087 aaKnown RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 CEP97Q8IW35 865 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 FSTL5Q8N475 847 aaPredicted RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 TMEM151AQ8N4L1 468 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 NUDCD1Q96RS6 583 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 DENND2DQ9H6A0 471 aaPredicted RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 MROH6A6NGR9 719 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 SLC7A4O43246 635 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 SBK3P0C264 359 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 GCKP35557 465 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 CPA2P48052 419 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 GLRBP48167 497 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 VEGFBP49765 207 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 CLCN5P51795 746 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 HK2P52789 917 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ASPHQ12797 758 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 LAMB3Q13751 1172 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 IHHQ14623 411 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 GALNT7Q86SF2 657 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 BBS5Q8N3I7 341 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF781Q8N8C0 355 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 IFT43Q96FT9 208 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 FEM1CQ96JP0 617 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF570Q96NI8 536 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 SEMA3CQ99985 751 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 DRC3Q9H069 523 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 ILKAPQ9H0C8 392 aaPredicted RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 MAGEH1Q9H213 219 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 PDFQ9HBH1 243 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 LRRC42Q9Y546 428 aa16.82■□□□□ 0.28
TMEM39B-201ENST00000336294 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 TTC24A2A3L6 582 aaPredicted RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 RPSAP08865 295 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 ATXN1LP0C7T5 689 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 HLA-DPA1P20036 260 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 SLC6A4P31645 630 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 LEPRP48357 1165 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 TAS2R39P59534 338 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 KDSRQ06136 332 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF460Q14592 562 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 DNAL1Q4LDG9 190 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 RFWD3Q6PCD5 774 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 KLHDC10Q6PID8 442 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 LMNTD2Q8IXW0 634 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 CFAP52Q8N1V2 620 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 TDRD5Q8NAT2 981 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 TET1Q8NFU7 2136 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 OR13J1Q8NGT2 312 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 NXNL1Q96CM4 212 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 PAK6Q9NQU5 681 aaPredicted RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 XPR1Q9UBH6 696 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 AFF4Q9UHB7 1163 aaKnown RBP16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 RAP2CQ9Y3L5 183 aa16.81■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF840PA6NDX5 716 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 TARM1B6A8C7 271 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 KIF1CO43896 1103 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 UPP2O95045 317 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 FGF1P05230 155 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 PGM1P36871 562 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 GRIA4P48058 902 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms