RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 NOL3O60936 208 aaKnown RBP6.93□□□□□ -1.3
SF3B1-201ENST00000335508 ITGA2BP08514 1039 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 LTA4HP09960 611 aaKnown RBP6.93□□□□□ -1.3
SF3B1-201ENST00000335508 SLC26A3P40879 764 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 SUOXP51687 545 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 MMRN1Q13201 1228 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 MOGSQ13724 837 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 CACHD1Q5VU97 1274 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 BRAT1Q6PJG6 821 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 TRIM48Q8IWZ4 208 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 OR56A4Q8NGH8 313 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 CDC26Q8NHZ8 85 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 TCP10LQ8TDR4 215 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 ASZ1Q8WWH4 475 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
SF3B1-201ENST00000335508 LZTS1Q9Y250 596 aa6.93□□□□□ -1.3
SF3B1-201ENST00000335508 CCT8L1PA6NM43 557 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 SPTLC1O15269 473 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TEX28O15482 410 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ESRRBO95718 433 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FTH1P02794 183 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 UGT2B4P06133 528 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 DLDP09622 509 aaKnown RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 HK2P52789 917 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 RPS24P62847 133 aaKnown RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CHI3L2Q15782 390 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FNDC3BQ53EP0 1204 aaKnown RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ADCK2Q7Z695 626 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 POF1BQ8WVV4 589 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 STARD8Q92502 1023 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CSNK1G1Q9HCP0 422 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CATSPERZQ9NTU4 200 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FLRT1Q9NZU1 646 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 SUPT3HB4E1H0 165 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 C1QTNF8P60827 252 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 IRF8Q02556 426 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CRYMQ14894 314 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TAF11Q15544 211 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 KBTBD6Q86V97 674 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 SYTL1Q8IYJ3 562 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FLCNQ8NFG4 579 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 HDAC10Q969S8 669 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ARMC5Q96C12 935 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 SYT11Q9BT88 431 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 GBA3Q9H227 469 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ZFYVE1Q9HBF4 777 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 NR2E1Q9Y466 385 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 DSG1Q02413 1049 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ACSM2AQ08AH3 577 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 FAM153CQ494X1 144 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 N4BP2L1Q5TBK1 243 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ACSM2BQ68CK6 577 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TXNDC8Q6A555 127 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TMC5Q6UXY8 1006 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PACS1Q6VY07 963 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ZNF567Q8N184 647 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 RIN3Q8TB24 985 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 METTL6Q8TCB7 284 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 KLHL5Q96PQ7 755 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 APOL5Q9BWW9 433 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 GIMAP4Q9NUV9 329 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PLK2Q9NYY3 685 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TOGARAM1Q9Y4F4 1720 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 WDR27A2RRH5 827 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TULP2O00295 520 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 BIRC5O15392 142 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PAPSS2O95340 614 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ANP32DO95626 131 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 IL1BP01584 269 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ARL4DP49703 201 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 SLC18A1P54219 525 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CAP1Q01518 475 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 CYP2A13Q16696 494 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PAGE2BQ5JRK9 111 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 RINLQ6ZS11 566 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PHACTR4Q8IZ21 702 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 MYO19Q96H55 970 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 MRPL57Q9BQC6 102 aaKnown RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ADAM33Q9BZ11 813 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TCF7L2Q9NQB0 619 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 EIF3LQ9Y262 564 aaKnown RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 KAT6AQ92794 2004 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 LRRC72A6NJI9 287 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 VPS4BO75351 444 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 DNTTP04053 509 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PTGER3P43115 390 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 LIMK2P53671 638 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 IFI35P80217 286 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-201ENST00000335508 HIC1Q14526 733 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PDK4Q16654 411 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TMEM63BQ5T3F8 832 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 TTC27Q6P3X3 843 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 KLHL35Q6PF15 583 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 OTUB1Q96FW1 271 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms