RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 ENTPD2Q9Y5L3 495 aa24.71■■□□□ 1.55
CDKN3-202ENST00000335183 ERVH48-1M5A8F1 160 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 RIOK3O14730 519 aaKnown RBP24.7■■□□□ 1.54
CDKN3-202ENST00000335183 AREL1O15033 823 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 LZTS3O60299 673 aaPredicted RBP24.7■■□□□ 1.54
CDKN3-202ENST00000335183 GCATO75600 419 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 TMCC1O94876 653 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 ANXA6P08133 673 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 ITIH2P19823 946 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 RPIAP49247 311 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 HDAC4P56524 1084 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 CFHR1Q03591 330 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 FAXCQ5TGI0 409 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 PCSK4Q6UW60 755 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 ZNF605Q86T29 641 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 TPCN2Q8NHX9 752 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 WRAP53Q9BUR4 548 aaKnown RBP24.7■■□□□ 1.54
CDKN3-202ENST00000335183 LRRC61Q9BV99 259 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 BOCQ9BWV1 1114 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 C1QTNF7Q9BXJ2 289 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 SLC13A1Q9BZW2 595 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 NUP62CLQ9H1M0 184 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 VPS16Q9H269 839 aa24.7■■□□□ 1.54
CDKN3-202ENST00000335183 FAM207AQ9NSI2 230 aaPredicted RBP24.7■■□□□ 1.54
CDKN3-202ENST00000335183 PNMA8BQ9ULN7 279 aaPredicted RBP24.7■■□□□ 1.54
CDKN3-202ENST00000335183 ZSCAN5CA6NGD5 496 aaPredicted RBP24.69■■□□□ 1.54
CDKN3-202ENST00000335183 IGSF6O95976 241 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 KRT3P12035 628 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 SOX5P35711 763 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 RHOAP61586 193 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 YPEL5P62699 121 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 SLC35F3Q8IY50 421 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 CENPIQ92674 756 aaPredicted RBP24.69■■□□□ 1.54
CDKN3-202ENST00000335183 EPAS1Q99814 870 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 SELENOOQ9BVL4 669 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 TTYH3Q9C0H2 523 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 MBNL1Q9NR56 388 aaKnown RBP24.69■■□□□ 1.54
CDKN3-202ENST00000335183 ANKRD36A6QL64 1941 aa24.69■■□□□ 1.54
CDKN3-202ENST00000335183 A0A1W2PNU3 283 aaPredicted RBP24.68■■□□□ 1.54
CDKN3-202ENST00000335183 GPD1P21695 349 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 EIF4A3P38919 411 aaKnown RBP24.68■■□□□ 1.54
CDKN3-202ENST00000335183 NSFP46459 744 aaKnown RBP24.68■■□□□ 1.54
CDKN3-202ENST00000335183 RHDQ02161 417 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 KLHL40Q2TBA0 621 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 C6orf132Q5T0Z8 1188 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 TRIM72Q6ZMU5 477 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 MACC1Q6ZN28 852 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 SLFN11Q7Z7L1 901 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 PYROXD2Q8N2H3 581 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 TP53I13Q8NBR0 393 aaPredicted RBP24.68■■□□□ 1.54
CDKN3-202ENST00000335183 NTAN1Q96AB6 310 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 GRAMD1AQ96CP6 724 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 DPH1Q9BZG8 443 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 ADAM22Q9P0K1 906 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 DOLKQ9UPQ8 538 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 LRP4O75096 1905 aa24.68■■□□□ 1.54
CDKN3-202ENST00000335183 CASC3O15234 703 aaKnown RBP24.67■■□□□ 1.54
CDKN3-202ENST00000335183 TCEA3O75764 348 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 PLA2G2AP14555 144 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 TSHRP16473 764 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 XPAP23025 273 aaPredicted RBP24.67■■□□□ 1.54
CDKN3-202ENST00000335183 EPHB2P29323 1055 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 RFC1P35251 1148 aaPredicted RBP24.67■■□□□ 1.54
CDKN3-202ENST00000335183 PPARDQ03181 441 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 PTP4A2Q12974 167 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 SCYL2Q6P3W7 929 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 NAT6Q93015 286 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 SLC46A1Q96NT5 459 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 CCDC3Q9BQI4 270 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.67■■□□□ 1.54
CDKN3-202ENST00000335183 CLPBQ9H078 707 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 KLC2Q9H0B6 622 aa24.67■■□□□ 1.54
CDKN3-202ENST00000335183 HELZ2Q9BYK8 2649 aaKnown RBP24.66■■□□□ 1.54
CDKN3-202ENST00000335183 LMO7DNF2Z398 122 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 EPHB6O15197 1021 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 YY2O15391 372 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 UNGP13051 313 aaPredicted RBP24.66■■□□□ 1.54
CDKN3-202ENST00000335183 TIMP2P16035 220 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 JAM2P57087 298 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 IRF4Q15306 451 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 TCEA2Q15560 299 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 EFHC2Q5JST6 749 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 ESRP1Q6NXG1 681 aaKnown RBP24.66■■□□□ 1.54
CDKN3-202ENST00000335183 WDR59Q6PJI9 974 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 IGF2-ASQ6U949 168 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 RTL3Q8N8U3 475 aaKnown RBP24.66■■□□□ 1.54
CDKN3-202ENST00000335183 CASKIN2Q8WXE0 1202 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 EXOC2Q96KP1 924 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 TBATAQ96M53 351 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 PCDHB18PQ96TA0 734 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 NCAPGQ9BPX3 1015 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 NOL6Q9H6R4 1146 aaKnown RBP24.66■■□□□ 1.54
CDKN3-202ENST00000335183 PADI4Q9UM07 663 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 COQ6Q9Y2Z9 468 aa24.66■■□□□ 1.54
CDKN3-202ENST00000335183 PMS2P1A4D2B8 440 aa24.65■■□□□ 1.54
CDKN3-202ENST00000335183 TOR1BO14657 336 aa24.65■■□□□ 1.54
CDKN3-202ENST00000335183 INSIG1O15503 277 aa24.65■■□□□ 1.54
CDKN3-202ENST00000335183 CREB3O43889 395 aa24.65■■□□□ 1.54
CDKN3-202ENST00000335183 TPM2P07951 284 aa24.65■■□□□ 1.54
CDKN3-202ENST00000335183 CELA2BP08218 269 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms