RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CYB5D2Q8WUJ1 264 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 LRRN4Q8WUT4 740 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 SCFD1Q8WVM8 642 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 COPS5Q92905 334 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 EAF2Q96CJ1 260 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 RTP4Q96DX8 246 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 MRGPRX2Q96LB1 330 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 LINC00615Q96LM1 132 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 NLRP4Q96MN2 994 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF641Q96N77 438 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 PRMT1Q99873 361 aaKnown RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 PLCD4Q9BRC7 762 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 CCDC94Q9BW85 323 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 MRPL4Q9BYD3 311 aaKnown RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF700Q9H0M5 742 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 FZD3Q9NPG1 666 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 SEMA3GQ9NS98 782 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 PSD3Q9NYI0 1048 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 SUCLA2Q9P2R7 463 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 ABCF2Q9UG63 623 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 IKZF3Q9UKT9 509 aa1.59□□□□□ -2.15
LINC00643-201ENST00000334389 EPN1Q9Y6I3 576 aaPredicted RBP1.59□□□□□ -2.15
LINC00643-201ENST00000334389 HHLA1C9JL84 531 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 H7C417 338 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 LINC01387J3KSC0 135 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PLK4O00444 970 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 MUSKO15146 869 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 MATN3O15232 486 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GPAA1O43292 621 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EDIL3O43854 480 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CREG1O75629 220 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ADCY5O95622 1261 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 THEGLP0DJG4 465 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 KLK2P20151 261 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 KIF11P52732 1056 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DVL1P1P54792 670 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GTF2BQ00403 316 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 BIRC3Q13489 604 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 STAT4Q14765 748 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 NFATC4Q14934 902 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EMC2Q15006 297 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 BCL2A1Q16548 175 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 AANATQ16613 207 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLC5A12Q1EHB4 618 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLC35G1Q2M3R5 365 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 MCMDC2Q4G0Z9 681 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 C9orf64Q5T6V5 341 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FAM102AQ5T9C2 384 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLC9C2Q5TAH2 1124 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 AGBL4Q5VU57 503 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 Q6ZS52 159 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PSTKQ8IV42 348 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CHERPQ8IWX8 916 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FAM186BQ8IYM0 893 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FBXW8Q8N3Y1 598 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLC25A45Q8N413 288 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FBXO39Q8N4B4 442 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PNMA1Q8ND90 353 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 OR8K3Q8NH51 312 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CCHCR1Q8TD31 782 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 IGDCC4Q8TDY8 1250 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FAR1Q8WVX9 515 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 HTR3CQ8WXA8 447 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DLG3Q92796 817 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ECHDC3Q96DC8 303 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLC39A13Q96H72 371 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 COX14Q96I36 57 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DRC1Q96MC2 740 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZSWIM3Q96MP5 696 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF599Q96NL3 588 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ADPGKQ9BRR6 497 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TIMM29Q9BSF4 260 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ANO3Q9BYT9 981 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PITPNM3Q9BZ71 974 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TM6SF1Q9BZW5 370 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SLKQ9H2G2 1235 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 RNF122Q9H9V4 155 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FANCFQ9NPI8 374 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 NDFIP2Q9NV92 336 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SNTG2Q9NY99 539 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DEC1Q9P2X7 70 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZC3H7BQ9UGR2 993 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 KLHL3Q9UH77 587 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 LSM7Q9UK45 103 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SATB2Q9UPW6 733 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 B3GNT3Q9Y2A9 372 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 LOXL2Q9Y4K0 774 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PUS1Q9Y606 427 aaKnown RBP eCLIP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CDY1Q9Y6F8 540 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ANK3Q12955 4377 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 LCE6AA0A183 80 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GOLGA8JA6NMD2 632 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 HSPB2A8KAH6 182 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GOLGA8KD6RF30 607 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GOLGA8TH3BQL2 631 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 H3BSA7 217 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 K7ESM1 405 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EPHB6O15197 1021 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 KIF5CO60282 957 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms