RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 AHI1Q8N157 1196 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 ANKRD42Q8N9B4 389 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 SORCS1Q8WY21 1168 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 TTC17Q96AE7 1141 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CIPCQ9C0C6 399 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CATSPERBQ9H7T0 1116 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 YY1AP1Q9H869 796 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 NDFIP2Q9NV92 336 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CTNNAL1Q9UBT7 734 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 FBXO4Q9UKT5 387 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 OR51B4Q9Y5P0 310 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 R4GN57 208 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 EML5Q05BV3 1969 aa13.65□□□□□ -0.23
TUBB2A-201ENST00000333628 VPS13AQ96RL7 3174 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 WASH4PA8MWX3 477 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 H3BRJ5 948 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 APOC4-APOC2K7ER74 178 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 APOC2P02655 101 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 RHOCP08134 193 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 CD48P09326 243 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 POLR2EP19388 210 aaKnown RBP13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 IL4RP24394 825 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 ARL4AP40617 200 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 MAPKAPK2P49137 400 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 NUMBP49757 651 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 CCR3P51677 355 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 CDH6P55285 790 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 MPP2Q14168 576 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 TFDP2Q14188 446 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 KRT81Q14533 505 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 DMC1Q14565 340 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 EIF4HQ15056 248 aaKnown RBP13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 EGFLAMQ63HQ2 1017 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 C4orf22Q6V702 233 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 RTL3Q8N8U3 475 aaKnown RBP13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 ZNF398Q8TD17 642 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 IER2Q9BTL4 223 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 PITPNM3Q9BZ71 974 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 MUC3BQ9H195 1237 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 TRABDQ9H4I3 376 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 KLHL11Q9NVR0 708 aa13.64□□□□□ -0.23
TUBB2A-201ENST00000333628 DMDP11532 3685 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 A0A0D9SEW6 157 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ILVBLA1L0T0 632 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 CHURC1-FNTBB4DL54 471 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 KLF8O95600 359 aaPredicted RBP13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 TDGF1P13385 188 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 HNRNPLP14866 589 aaKnown RBP eCLIP13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ERCC2P18074 760 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 TAC1P20366 129 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 AMPD1P23109 780 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 GCAP28676 217 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ALDH3A1P30838 453 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 DPYSQ14117 519 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 LRRC14Q15048 493 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 PDK2Q15119 407 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 TMED2Q15363 201 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 PDK4Q16654 411 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 SPRED3Q2MJR0 410 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 MAP7D3Q8IWC1 876 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 PDIK1LQ8N165 341 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 CCDC33Q8N5R6 958 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ZNF513Q8N8E2 541 aaPredicted RBP13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 NAT8LQ8N9F0 302 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 IL17RCQ8NAC3 791 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 UCMAQ8WVF2 138 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 ACOX2Q99424 681 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 DHRS4Q9BTZ2 278 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 CALN1Q9BXU9 219 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 VPS37BQ9H9H4 285 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 PLA2G4CQ9UP65 541 aa13.63□□□□□ -0.23
TUBB2A-201ENST00000333628 CFAP69A5D8W1 941 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 WASH3PC4AMC7 463 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 K7ESF4 209 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 TM9SF1O15321 606 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 CST8O60676 142 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 ATG13O75143 517 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 DLDP09622 509 aaKnown RBP13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 CREB1P16220 341 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 KRT15P19012 456 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 GNA12Q03113 381 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 DMWDQ09019 674 aa13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 PDIA2Q13087 525 aaKnown RBP13.62□□□□□ -0.23
TUBB2A-201ENST00000333628 DPYSL3Q14195 570 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms