RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SLC30A9Q6PML9 568 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ARCQ7LC44 396 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 MAF1Q9H063 256 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 C9IYK1 514 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 KRT36O76013 467 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 CXCL14O95715 111 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 BPGMP07738 259 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 CORO1AP31146 461 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PTPN9P43378 593 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 GSSP48637 474 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 GJA9P57773 515 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TP53BP2Q13625 1128 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 GBA3Q9H227 469 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 GNPTGQ9UJJ9 305 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PDZK1P1A8MUH7 402 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PIGRP01833 764 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 FASP25445 335 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 SEMA5AQ13591 1074 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 NRF1Q16656 503 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 OOSP2Q86WS3 158 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 CYP4X1Q8N118 509 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 BTN2A3PQ96KV6 586 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 NSMCE2Q96MF7 247 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ATP13A3Q9H7F0 1226 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ARL8BQ9NVJ2 186 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 MPSTP25325 297 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PBX3P40426 434 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 NCALDP61601 193 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 SYPL2Q5VXT5 272 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 HMCESQ96FZ2 354 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ZFP14Q9HCL3 533 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 BIRC5O15392 142 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 RGS14O43566 566 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 UGT1A9O60656 530 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 DAOAP59103 153 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 SGCGQ13326 291 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 CDYL2Q8N8U2 506 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ACBD6Q9BR61 282 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 C1orf50Q9BV19 199 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 UGT1A7Q9HAW7 530 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 UGT1A10Q9HAW8 530 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 UGT1A8Q9HAW9 530 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 IMPAD1Q9NX62 359 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 NMBRP28336 390 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 TTPAP49638 278 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ADGRD1Q6QNK2 874 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PRSS55Q6UWB4 352 aaPredicted RBP13.1□□□□□ -0.31
VSTM4-202ENST00000332853 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 FBXL18Q96ME1 805 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 LZTS1Q9Y250 596 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 PRR5-ARHGAP8B1AHC4 643 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 KDM1AO60341 852 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 LPOP22079 712 aaPredicted RBP13.1□□□□□ -0.31
VSTM4-202ENST00000332853 ARHGAP8P85298 464 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 HJURPQ8NCD3 748 aaPredicted RBP13.1□□□□□ -0.31
VSTM4-202ENST00000332853 SLC25A23Q9BV35 468 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 WDR55Q9H6Y2 383 aaPredicted RBP13.1□□□□□ -0.31
VSTM4-202ENST00000332853 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
VSTM4-202ENST00000332853 C2P06681 752 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 GRK3P35626 688 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 OGDHQ02218 1023 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NKAPQ8N5F7 415 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 LINGO1Q96FE5 620 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 CDH19Q9H159 772 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 RERGLQ9H628 205 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF711Q9Y462 761 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 CCL16O15467 120 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ATP5BP06576 529 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 LBPP18428 481 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms