RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 CNTD1Q8N815 330 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 RAB7BQ96AH8 199 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 RTP4Q96DX8 246 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 KLHL32Q96NJ5 620 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 HDAC8Q9BY41 377 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 CEP41Q9BYV8 373 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 USP29Q9HBJ7 922 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 ITM2CQ9NQX7 267 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 ZSCAN32Q9NX65 697 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 DKK3Q9UBP4 350 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 CDC23Q9UJX2 597 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 FZD4Q9ULV1 537 aa14.24□□□□□ -0.13
CMTM1-201ENST00000328020 AAR2Q9Y312 384 aaKnown RBP14.24□□□□□ -0.13
CMTM1-201ENST00000328020 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
CMTM1-201ENST00000328020 ESPNB1AK53 854 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 CTSLP07711 333 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 COILP38432 576 aaPredicted RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 CD86P42081 329 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 RGRP47804 291 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 TPMTP51580 245 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 NEK3P51956 506 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 GEMP55040 296 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 RPL26P61254 145 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 DSC2Q02487 901 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 WHAMMP3Q1A5X7 153 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 PARP6Q2NL67 630 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 ARMC12Q5T9G4 340 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 CCDC137Q6PK04 289 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 TSSK4Q6SA08 328 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 ERN2Q76MJ5 926 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 MNS1Q8NEH6 495 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 CCHCR1Q8TD31 782 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 IFT43Q96FT9 208 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 IMP4Q96G21 291 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 FCRL5Q96RD9 977 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 ADGRE3Q9BY15 652 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 TPSD1Q9BZJ3 242 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 GBA3Q9H227 469 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 C10orf88Q9H8K7 445 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 SGK2Q9HBY8 427 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 USP36Q9P275 1121 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 PAK5Q9P286 719 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 FAM153AQ9UHL3 310 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 RPL26L1Q9UNX3 145 aaKnown RBP14.23□□□□□ -0.13
CMTM1-201ENST00000328020 PCDHGA2Q9Y5H1 932 aa14.23□□□□□ -0.13
CMTM1-201ENST00000328020 ANKRD36A6QL64 1941 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 A0A1W2PP55 124 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 LRRC72A6NJI9 287 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 C16orf96A6NNT2 1141 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 PSMD3O43242 534 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 MAP3K13O43283 966 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 NDUFS2O75306 463 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 PIGNO95427 931 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 IGLV3-19P01714 112 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 SP9P0CG40 484 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 TDGF1P13385 188 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 NFKB1P19838 968 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
CMTM1-201ENST00000328020 FNTBP49356 437 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 EPHB1P54762 984 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 MPP3Q13368 585 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
CMTM1-201ENST00000328020 ERAP2Q6P179 960 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 TTC7BQ86TV6 843 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 CAMK1DQ8IU85 385 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 MAML2Q8IZL2 1156 aaPredicted RBP14.22□□□□□ -0.13
CMTM1-201ENST00000328020 ARRDC2Q8TBH0 407 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 CCDC110Q8TBZ0 833 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
CMTM1-201ENST00000328020 BTBD1Q9H0C5 482 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 SLC6A17Q9H1V8 727 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 KDM4CQ9H3R0 1056 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 TPX2Q9ULW0 747 aaKnown RBP14.22□□□□□ -0.13
CMTM1-201ENST00000328020 RAI2Q9Y5P3 530 aa14.22□□□□□ -0.13
CMTM1-201ENST00000328020 E7EVH7 732 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 NEMP1O14524 444 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 FANCGO15287 622 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 ZNF500O60304 480 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 RPP40O75818 363 aaKnown RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 ECEL1O95672 775 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 CPP00450 1065 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 CD6P30203 668 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 GKP32189 559 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 FDFT1P37268 417 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 P2RY2P41231 377 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 NIPAL4Q0D2K0 466 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 ELP6Q0PNE2 266 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 CNTN1Q12860 1018 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 POM121L1PQ3SYA9 428 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 SYDE1Q6ZW31 735 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 ZNF419Q96HQ0 510 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 SRPK1Q96SB4 655 aaKnown RBP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.13
CMTM1-201ENST00000328020 FSD1LQ9BXM9 530 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms