RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 COL6A2P12110 1019 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 LMO2P25791 158 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 HLA-DQA1Q5Y7H0 255 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 PCBD2Q9H0N5 130 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 LY75O60449 1722 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 LRCH4O75427 683 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 OAZ2O95190 189 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 MYBL2P10244 700 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 NDUFS1P28331 727 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 CDH5P33151 784 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 SOAT1P35610 550 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 FLT3P36888 993 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 SUZ12Q15022 739 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 KLHL23Q8NBE8 558 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 A0A096LPK6 155 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 M0R3G1 203 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 EPHB6O15197 1021 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 GJB6O95452 261 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 FAM107AO95990 144 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 PPP2R1BP30154 601 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 FMO4P31512 558 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 GPC1P35052 558 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 ABL2P42684 1182 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 ILF3Q12906 894 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 MFSD4BQ5TF39 518 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 ZCCHC8Q6NZY4 707 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 TMC5Q6UXY8 1006 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 NINJ2Q9NZG7 142 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
CCDC149-201ENST00000324309 TDRKHQ9Y2W6 561 aaKnown RBP12.89□□□□□ -0.35
CCDC149-201ENST00000324309 ANKDD1BA6NHY2 528 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 TPH1P17752 444 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 GABRB2P47870 512 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CYP4F8P98187 520 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 GALNT13Q8IUC8 556 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 OR52K1Q8NGK4 314 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ING5Q8WYH8 240 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 KAT2BQ92831 832 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 RERGQ96A58 199 aaPredicted RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 MIEF1Q9NQG6 463 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ARL15Q9NXU5 204 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ZNHIT2Q9UHR6 403 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CCNT2O60583 730 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 RNASEH2AO75792 299 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 PROZP22891 400 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ECT2LQ008S8 904 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 LAPTM5Q13571 262 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 MILR1Q7Z6M3 343 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ATAD3AQ9NVI7 634 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ADAM21Q9UKJ8 722 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 SLC25A14O95258 325 aaPredicted RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ZNF30P17039 623 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 RPL17P18621 184 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 SERPINB5P36952 375 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CCNFP41002 786 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CBX2Q14781 532 aaPredicted RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 UBXN2BQ14CS0 331 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CD101Q93033 1021 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 FAM111AQ96PZ2 611 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 NELL2Q99435 816 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 LRIG2O94898 1065 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 LRRC14Q15048 493 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 NDUFA9Q16795 377 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 AGMOQ6ZNB7 445 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CYP4Z1Q86W10 505 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 RAVER1Q8IY67 606 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 USP6NLQ92738 828 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 ZNF556Q9HAH1 456 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
CCDC149-201ENST00000324309 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
CCDC149-201ENST00000324309 BTN3A1O00481 513 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 CD3EAPO15446 510 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 AP2A1O95782 977 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 TAS2R40P59535 323 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms