RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
PACS1-201ENST00000320580 CENPLQ8N0S6 344 aaPredicted RBP16.75■□□□□ 0.27
PACS1-201ENST00000320580 ARHGEF4Q9NR80 690 aa16.75■□□□□ 0.27
PACS1-201ENST00000320580 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
PACS1-201ENST00000320580 A6NL46 340 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 A8MV72 311 aaPredicted RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 PRKD3O94806 890 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 FADS2O95864 444 aaKnown RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 ZNF37AP17032 561 aaPredicted RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 PSMB4P28070 264 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 OR2B6P58173 313 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 EPS8Q12929 822 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 FAM131BQ86XD5 332 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 MPP5Q8N3R9 675 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 RASSF5Q8WWW0 418 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 HGH1Q9BTY7 390 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 NAA50Q9GZZ1 169 aaKnown RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 C3orf18Q9UK00 162 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 CDH9Q9ULB4 789 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 LRP6O75581 1613 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 CCNE2O96020 404 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 ASNSP08243 561 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 SULT1E1P49888 294 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 EMC2Q15006 297 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 SF3B4Q15427 424 aaKnown RBP eCLIP16.74■□□□□ 0.275e-8■■■■□ 21.4
PACS1-201ENST00000320580 KLHL17Q6TDP4 642 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 Q8N9G6 341 aaPredicted RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 SMOXQ9NWM0 555 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 HPCAL1P37235 193 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 TPI1P60174 286 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 PCLAFQ15004 111 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 ZCCHC8Q6NZY4 707 aaKnown RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 PIWIL4Q7Z3Z4 852 aaKnown RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 LRRC20Q8TCA0 184 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 PRRG3Q9BZD7 231 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 POPDC2Q9HBU9 364 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 ADAM28Q9UKQ2 775 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 COPG1Q9Y678 874 aaKnown RBP16.74■□□□□ 0.27
PACS1-201ENST00000320580 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
PACS1-201ENST00000320580 TMBIM6P55061 237 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 PRKCEQ02156 737 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ANGPTL8Q6UXH0 198 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 SLC41A1Q8IVJ1 513 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ABHD11Q8NFV4 315 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 RMDN1Q96DB5 314 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 SUPT3HB4E1H0 165 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 LOC110117498-PIK3R3F6TDL0 507 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 PLSCR1O15162 318 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 NOS1APO75052 506 aaPredicted RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 WBP4O75554 376 aaKnown RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 NCK1P16333 377 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 PTPN11Q06124 597 aaPredicted RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 PGM2L1Q6PCE3 622 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 RAB43Q86YS6 212 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ADGRF2Q8IZF7 708 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 TBC1D15Q8TC07 691 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 RBBP8Q99708 897 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 TMEM246Q9BRR3 403 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 SYT11Q9BT88 431 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ZNF717Q9BY31 904 aaPredicted RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 STAP1Q9ULZ2 295 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 CPQQ9Y646 472 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 IL1BP01584 269 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 FAM163BP0C2L3 166 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 SLURP2P0DP57 97 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 CDHR1Q96JP9 859 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 CCT8P50990 548 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 PDZK1Q5T2W1 519 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 ERMP1Q7Z2K6 904 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 EFL1Q7Z2Z2 1120 aaKnown RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 PIWIL3Q7Z3Z3 882 aaKnown RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 CCDC28AQ8IWP9 274 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 LEMD2Q8NC56 503 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 MID1IP1Q9NPA3 183 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 SUCOQ9UBS9 1254 aaKnown RBP16.73■□□□□ 0.27
PACS1-201ENST00000320580 RIMS3Q9UJD0 308 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 PPME1Q9Y570 386 aa16.73■□□□□ 0.27
PACS1-201ENST00000320580 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 CCDC154A6NI56 674 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 ATG7O95352 703 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 PRLP01236 227 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 SLC26A3P40879 764 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 GRIA1P42261 906 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 MPP1Q00013 466 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 VPS26BQ4G0F5 336 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 CCSAPQ6IQ19 270 aaPredicted RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 PACRGLQ8N7B6 248 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 ZNF486Q96H40 463 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms