RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 HIDE1A8MVS5 230 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 MAN2B1O00754 1011 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 CPSF4O95639 269 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 ZNF542PQ5EBM4 170 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 TTC9BQ8N6N2 239 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 WFIKKN2Q8TEU8 576 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 PCDHA3Q9Y5H8 950 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 CTBP1Q13363 440 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 RUNX3Q13761 415 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 FBXO39Q8N4B4 442 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 OSCP1Q8WVF1 389 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 MAGEH1Q9H213 219 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 CNOT10Q9H9A5 744 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 CRTAC1Q9NQ79 661 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 OGDHLQ9ULD0 1010 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 TCHHQ07283 1943 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 SYCE1LA8MT33 242 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 IRAK2O43187 625 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 ACP5P13686 325 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 RPA3P35244 121 aaPredicted RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 C1orf61Q13536 156 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 PEX6Q13608 980 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 PARP15Q460N3 678 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 RAVER1Q8IY67 606 aaKnown RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 MIER2Q8N344 545 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
NBPF3-201ENST00000318220 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 IRGQQ8WZA9 623 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 FGF13Q92913 245 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
NBPF3-201ENST00000318220 C2orf78A6NCI8 922 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 VNN1O95497 513 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 PWP1Q13610 501 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 MRPL43Q8N983 215 aaKnown RBP13.33□□□□□ -0.27
NBPF3-201ENST00000318220 METTL6Q8TCB7 284 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 ATOH1Q92858 354 aaPredicted RBP13.33□□□□□ -0.27
NBPF3-201ENST00000318220 HAUS8Q9BT25 410 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 GGA2Q9UJY4 613 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 V9GYQ6 96 aa13.33□□□□□ -0.27
NBPF3-201ENST00000318220 HACD1B0YJ81 288 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 MT-CYBP00156 380 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 NPY2RP49146 381 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 SMOQ99835 787 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 HMGB1P1B2RPK0 211 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 MTX2O75431 263 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ASLP04424 464 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ALDH18A1P54886 795 aaKnown RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 TTC39BQ5VTQ0 682 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 BBS4Q96RK4 519 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ZNF670Q9BS34 389 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 EVPLLA8MZ36 301 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 LRCH4O75427 683 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ERAL1O75616 437 aaKnown RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ENO3P13929 434 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 GNPDA1P46926 289 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 ERVFC1P60507 584 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 CYP4F2P78329 520 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 DPYSL3Q14195 570 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 STK40Q8N2I9 435 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 THUMPD3Q9BV44 507 aaKnown RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.28
NBPF3-201ENST00000318220 PARVBQ9HBI1 364 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 GLOD4Q9HC38 313 aa13.33□□□□□ -0.28
NBPF3-201ENST00000318220 MAGEB16A2A368 324 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 TMEM191CA6NGB0 347 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 MFSD11O43934 449 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 KRT6AP02538 564 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 FTH1P02794 183 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 KRT6BP04259 564 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 KRT6CP48668 564 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 GRM3Q14832 879 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 SUZ12Q15022 739 aaKnown RBP13.32□□□□□ -0.28
NBPF3-201ENST00000318220 SLC39A4Q6P5W5 647 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 LDB1Q86U70 411 aaPredicted RBP13.32□□□□□ -0.28
NBPF3-201ENST00000318220 SLC39A11Q8N1S5 342 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 Q8N9G6 341 aaPredicted RBP13.32□□□□□ -0.28
NBPF3-201ENST00000318220 LMX1AQ8TE12 382 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 AHSPQ9NZD4 102 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 CDH7Q9ULB5 785 aa13.32□□□□□ -0.28
NBPF3-201ENST00000318220 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms