RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C1QTNF1Q9BXJ1 281 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 NMRAL1Q9HBL8 299 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 FBXO6Q9NRD1 293 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 TXLNGQ9NUQ3 528 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 KCNK4Q9NYG8 393 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 UBA2Q9UBT2 640 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 FAM95CA0A1B0GW59 222 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 G3V2L1 256 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 AURKAO14965 403 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 SLC35E2BP0CK96 405 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 RALBP11234 206 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 SMAD3P84022 425 aaKnown RBP18.52■□□□□ 0.56
CCDC43-201ENST00000315286 ITGA9Q13797 1035 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 ALG1LQ6GMV1 187 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 FBXO46Q6PJ61 603 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-201ENST00000315286 CEP97Q8IW35 865 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 TMEM199Q8N511 208 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 SKA1Q96BD8 255 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 ARMC5Q96C12 935 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 NSMCE3Q96MG7 304 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 PSKH2Q96QS6 385 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 IL21Q9HBE4 155 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 SEPT3Q9UH03 358 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 HAO1Q9UJM8 370 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 ANKRD6Q9Y2G4 727 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 TBC1D30Q9Y2I9 924 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 KCTD3Q9Y597 815 aa18.52■□□□□ 0.56
CCDC43-201ENST00000315286 OBSL1O75147 1896 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CCL22O00626 93 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 LDB2O43679 373 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CBX6O95503 412 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 SERPINF2P08697 491 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 NQO1P15559 274 aaKnown RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 RGRP47804 291 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CD151P48509 253 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ZXDBP98169 803 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 GALNT3Q14435 633 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ZNF460Q14592 562 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CTC1Q2NKJ3 1217 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 SPDYAQ5MJ70 313 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 TXNDC8Q6A555 127 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CYB5D1Q6P9G0 228 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CNSTQ6PJW8 725 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 SETD3Q86TU7 594 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 BBS5Q8N3I7 341 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ARL14EPQ8N8R7 260 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 PNPLA1Q8N8W4 532 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ACE2Q9BYF1 805 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 NOD2Q9HC29 1040 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ARHGEF3Q9NR81 526 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CBX4O00257 560 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 DNAJC6O75061 913 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ATP5HO75947 161 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 FGF18O76093 207 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 EPOP01588 193 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CNPP09543 421 aaKnown RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 GRK2P25098 689 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ARRB2P32121 409 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CA8P35219 290 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 PPM1AP35813 382 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ARSDP51689 593 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 AQP5P55064 265 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ELF3P78545 371 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ZBTB16Q05516 673 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ZNF789Q5FWF6 425 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 RNF219Q5W0B1 726 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CXorf57Q6NSI4 855 aaKnown RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 HERC6Q8IVU3 1022 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 OR6Y1Q8NGX8 325 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 ADAMTS19Q8TE59 1207 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 HDAC10Q969S8 669 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 PRR11Q96HE9 360 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CINPQ9BW66 212 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 TASP1Q9H6P5 420 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 KLC4Q9NSK0 619 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 CPSF2Q9P2I0 782 aaKnown RBP18.51■□□□□ 0.55
CCDC43-201ENST00000315286 STOML2Q9UJZ1 356 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 PCDHB12Q9Y5F1 795 aa18.51■□□□□ 0.55
CCDC43-201ENST00000315286 FGF1P05230 155 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 HLA-DPA1P20036 260 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 POLD2P49005 469 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 TAS2R39P59534 338 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 RAB10P61026 200 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 SLC12A1Q13621 1099 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 KIAA0408Q6ZU52 694 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 PTAR1Q7Z6K3 402 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 TMEM151AQ8N4L1 468 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 GPATCH11Q8N954 259 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 CALML6Q8TD86 181 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 BLOC1S5Q8TDH9 187 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 KCTD4Q8WVF5 259 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 ELMO2Q96JJ3 720 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 EXOC2Q96KP1 924 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 TMEM237Q96Q45 408 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 SORT1Q99523 831 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 DDX50Q9BQ39 737 aaKnown RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 ZBP1Q9H171 429 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 RUVBL2Q9Y230 463 aaKnown RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 DNAJC16Q9Y2G8 782 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms