RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 PLK5Q496M5 336 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 TTC31Q49AM3 519 aaPredicted RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 FAM46CQ5VWP2 391 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 ALG1LQ6GMV1 187 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 ERN2Q76MJ5 926 aaKnown RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 CEP68Q76N32 757 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 PRPF39Q86UA1 669 aaKnown RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 PRELID2Q8N945 189 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 FAM71DQ8N9W8 422 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 OR14C36Q8NHC7 312 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 CCDC110Q8TBZ0 833 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 TEKT5Q96M29 485 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 C16orf45Q96MC5 204 aaPredicted RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 RBM15Q96T37 977 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 GORASP1Q9BQQ3 440 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 POLR1EQ9GZS1 481 aaKnown RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 BRD8Q9H0E9 1235 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 SUV39H2Q9H5I1 410 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
PDE4D-201ENST00000309641 RIF1Q5UIP0 2472 aaKnown RBP9.19□□□□□ -0.94
PDE4D-201ENST00000309641 OTOGLQ3ZCN5 2332 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 KNL1Q8NG31 2342 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 BCLAF3A2AJT9 711 aaKnown RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 MAP3K13O43283 966 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 LIASO43766 372 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 NEBLO76041 1014 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 ADRB3P13945 408 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 TIMP2P16035 220 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 NFKB1P19838 968 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 MAOBP27338 520 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 KCNJ1P48048 391 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 AP1S1P61966 158 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PPP2CBP62714 309 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PPP2CAP67775 309 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 RAD51Q06609 339 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 HS1BP3Q53T59 392 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PAPD7Q5XG87 772 aaKnown RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 SYT10Q6XYQ8 523 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 USP30Q70CQ3 517 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PID1Q7Z2X4 250 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 KDELC2Q7Z4H8 507 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 BBS5Q8N3I7 341 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 GLIS1Q8NBF1 620 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 SUMF1Q8NBK3 374 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PDCD6IPQ8WUM4 868 aaKnown RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 ECHDC3Q96DC8 303 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 TRIM44Q96DX7 344 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 LRIG1Q96JA1 1093 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 PBKQ96KB5 322 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 SPACA7Q96KW9 195 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 NAPGQ99747 312 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 AP1M1Q9BXS5 423 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 BTBD1Q9H0C5 482 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 EBF2Q9HAK2 575 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 GLOD4Q9HC38 313 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 KLHL8Q9P2G9 620 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-201ENST00000309641 SCML1Q9UN30 329 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
PDE4D-201ENST00000309641 CTAGE9A4FU28 777 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 A8MX80 341 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PDE2AO00408 941 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 HTRA2O43464 458 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PLRG1O43660 514 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SEMA4FO95754 770 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PRLP01236 227 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ETS1P14921 441 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 MSNP26038 577 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 HSPA9P38646 679 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 NBL1P41271 181 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SKOR1P84550 965 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PMS2CLQ68D20 193 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TTC7BQ86TV6 843 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CDKL3Q8IVW4 592 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 OXNAD1Q96HP4 312 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 HSPA12BQ96MM6 686 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TUBGCP5Q96RT8 1024 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 OSBPL1AQ9BXW6 950 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 HDAC8Q9BY41 377 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ATP13A3Q9H7F0 1226 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 DYRK4Q9NR20 520 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 FZD4Q9ULV1 537 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CHKBQ9Y259 395 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 NCKAP1Q9Y2A7 1128 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PCDHB9Q9Y5E1 797 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 RAI2Q9Y5P3 530 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZNF292O60281 2723 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 C10orf142B7Z368 130 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 IGHV4-34P06331 123 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZSCAN5DPP0CG00 497 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms