RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BPIFB6Q8NFQ5 453 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 RIN3Q8TB24 985 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ACOT9Q9Y305 439 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 TOR1BO14657 336 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 RFPL1O75677 317 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ALBP02768 609 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CRHR1P34998 444 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ADRA1BP35368 520 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 NUP107P57740 925 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CCNIQ14094 377 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 INPP5AQ14642 412 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CTC1Q2NKJ3 1217 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 LSM12Q3MHD2 195 aaKnown RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TBC1D25Q3MII6 688 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 IL23RQ5VWK5 629 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 DNAJC14Q6Y2X3 702 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 DNAJB14Q8TBM8 379 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TRIM8Q9BZR9 551 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TMEM30AQ9NV96 361 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 HDAC3O15379 428 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CD1EP15812 388 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 LRPAP1P30533 357 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ZBTB17Q13105 803 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 LSAMPQ13449 338 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CYP51A1Q16850 503 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ELMO1Q92556 727 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ZNF670Q9BS34 389 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 MRPS26Q9BYN8 205 aaKnown RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 LRRC40Q9H9A6 602 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 XPR1Q9UBH6 696 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ATP11BQ9Y2G3 1177 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 M0R3G1 203 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ZFXP17010 805 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CRABP2P29373 138 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 NR1D2Q14995 579 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 TEDDM1Q5T9Z0 273 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 CYP4V2Q6ZWL3 525 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 ARCQ7LC44 396 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 RAB44Q7Z6P3 723 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-201ENST00000309428 HERC6Q8IVU3 1022 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 LPGAT1Q92604 370 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 SLC45A3Q96JT2 553 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
RETREG3-201ENST00000309428 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 BCL10O95999 233 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 UGT1A6P19224 532 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.36
RETREG3-201ENST00000309428 NANOGNBQ7Z5D8 188 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 ABI1Q8IZP0 508 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 ESAMQ96AP7 390 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 NDEL1Q9GZM8 345 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.36
RETREG3-201ENST00000309428 AGO3Q9H9G7 860 aaKnown RBP12.77□□□□□ -0.36
RETREG3-201ENST00000309428 FAM105AQ9NUU6 356 aa12.77□□□□□ -0.36
RETREG3-201ENST00000309428 ALDOAP04075 364 aaKnown RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 FUT4P22083 530 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 HMOX2P30519 316 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 HSPA13P48723 471 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 SEMG2Q02383 582 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 BNIP3Q12983 259 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 SPIDRQ14159 915 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 CAPRIN1Q14444 709 aaKnown RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF792Q3KQV3 632 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 SLC25A52Q3SY17 297 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 FSTL4Q6MZW2 842 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 TAC4Q86UU9 113 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 RNF145Q96MT1 663 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 HBEGFQ99075 208 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 DUSP16Q9BY84 665 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 CDH19Q9H159 772 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 NOL6Q9H6R4 1146 aaKnown RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 C6orf203Q9P0P8 240 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 SH3GLB1Q9Y371 365 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 NRCAMQ92823 1304 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 TFEBP19484 476 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 PSMA4P25789 261 aaKnown RBP12.77□□□□□ -0.37
RETREG3-201ENST00000309428 GNA12Q03113 381 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 GRM3Q14832 879 aa12.77□□□□□ -0.37
RETREG3-201ENST00000309428 KIAA0319Q5VV43 1072 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms