RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 THOP1P52888 689 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 WNT3AP56704 352 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 POLD3Q15054 466 aaPredicted RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 UTP4Q969X6 686 aaKnown RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 FAM120BQ96EK7 910 aaKnown RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SIGLEC10Q96LC7 697 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 MPP6Q9NZW5 540 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 GPR182O15218 404 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 LINC00032P0C843 101 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 XRCC1P18887 633 aaPredicted RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 PTPN3P26045 913 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SCNN1GP51170 649 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 RPS6KA3P51812 740 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ITGADQ13349 1161 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 MFSD10Q14728 455 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SOWAHAQ2M3V2 549 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SFT2D3Q587I9 215 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 POTEHQ6S545 545 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 CAND1Q86VP6 1230 aaKnown RBP13.39□□□□□ -0.27
DDX54-201ENST00000306014 DENND6AQ8IWF6 608 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 FBXO30Q8TB52 745 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 LRTOMTQ8WZ04 291 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ZMYM5Q9UJ78 669 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 TSPAN1O60635 241 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 GNAZP19086 355 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 PRDX6P30041 224 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 RABGGTBP53611 331 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 OXCT1P55809 520 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 USP46P62068 366 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 MAPK11Q15759 364 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ABRAXAS1Q6UWZ7 409 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 RNF217Q8TC41 542 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SERPINB11Q96P15 392 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 ASB2Q96Q27 587 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 SNX10Q9Y5X0 201 aa13.39□□□□□ -0.27
DDX54-201ENST00000306014 MANSC4A6NHS7 340 aaPredicted RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 E7ESA3 106 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ZSCAN9O15535 394 aaPredicted RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 KRT8P05787 483 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 LRRC74AQ0VAA2 488 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 OLIG2Q13516 323 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CLEC6AQ6EIG7 209 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 OR56A4Q8NGH8 313 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PIWIL1Q96J94 861 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 C1orf50Q9BV19 199 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 DPY30Q9C005 99 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CLPBQ9H078 707 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CNGB3Q9NQW8 809 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 A0A0J9YYE9 177 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ZNF197O14709 1029 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CCNT2O60583 730 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 DLGAP3O95886 979 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ABL2P42684 1182 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CCT8P50990 548 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PPIL2Q13356 520 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ADGRE1Q14246 886 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 AARS2Q5JTZ9 985 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 SPPL2CQ8IUH8 684 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CLYBLQ8N0X4 340 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 STAG3L4Q8TBR4 150 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX54-201ENST00000306014 FAM32AQ9Y421 112 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 FZD9O00144 591 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 IPO13O94829 963 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 CCNG1P51959 295 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ZNF280AP59817 542 aaPredicted RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 PGS1Q32NB8 556 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PITRM1Q5JRX3 1037 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 IL27RAQ6UWB1 636 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 ZCCHC7Q8N3Z6 543 aaKnown RBP13.38□□□□□ -0.27
DDX54-201ENST00000306014 ZNF276Q8N554 614 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms