RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 C1orf50Q9BV19 199 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 THUMPD3Q9BV44 507 aaKnown RBP14.18□□□□□ -0.14
SDC2-201ENST00000302190 ABHD16BQ9H3Z7 469 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.18□□□□□ -0.14
SDC2-201ENST00000302190 RNF112Q9ULX5 631 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 OR51F1A6NGY5 319 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 GUCA1CO95843 209 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
SDC2-201ENST00000302190 RAB10P61026 200 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 FAM117BQ6P1L5 589 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 STRADAQ7RTN6 431 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 FAM35AQ86V20 835 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 DHFR2Q86XF0 187 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 APBB2Q92870 758 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 TSPAN17Q96FV3 270 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 FCRL2Q96LA5 508 aaPredicted RBP14.18□□□□□ -0.14
SDC2-201ENST00000302190 TINF2Q9BSI4 451 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 DRC3Q9H069 523 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 GIMAP2Q9UG22 337 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 SLC2A6Q9UGQ3 507 aa14.18□□□□□ -0.14
SDC2-201ENST00000302190 RPL26L1Q9UNX3 145 aaKnown RBP14.18□□□□□ -0.14
SDC2-201ENST00000302190 SLC12A8A0AV02 714 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 F8W8V4 182 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 ATG7O95352 703 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 FGF3P11487 239 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 PRKCHP24723 683 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 NPY2RP49146 381 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CLCNKBP51801 687 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 KCNK10P57789 538 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 DDR2Q16832 855 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CYP51A1Q16850 503 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 MBLAC2Q68D91 279 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 GPR142Q7Z601 462 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PLEKHH3Q7Z736 793 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 TMEM110Q86TL2 294 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 FCRL3Q96P31 734 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 SLC38A7Q9NVC3 462 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PFDN6O15212 129 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 GJA8P48165 433 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CRHR2Q13324 411 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 MILR1Q7Z6M3 343 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CYP2S1Q96SQ9 504 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PRDM16Q9HAZ2 1276 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 ZDHHC2Q9UIJ5 367 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 SYCE1LA8MT33 242 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 LINC00032P0C843 101 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PAX3P23760 479 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 IL4RP24394 825 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 FMO4P31512 558 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CDH5P33151 784 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PTGR2Q8N8N7 351 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 MAGEE2Q8TD90 523 aaPredicted RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 TRIM15Q9C019 465 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 LIN28AQ9H9Z2 209 aaKnown RBP14.17□□□□□ -0.14
SDC2-201ENST00000302190 NSMCE4AQ9NXX6 385 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 ADAMTS6Q9UKP5 1117 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 SORCS3Q9UPU3 1222 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 CNTN6Q9UQ52 1028 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 COMMD3-BMI1R4GMX3 469 aa14.17□□□□□ -0.14
SDC2-201ENST00000302190 PARP14Q460N5 1801 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 NCAM2O15394 837 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 TNFAIP8O95379 198 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 AP2A1O95782 977 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 CES1P23141 567 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 WNT3AP56704 352 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 SNX17Q15036 470 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 SLC39A12Q504Y0 691 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 GPR158Q5T848 1215 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ZNF410Q86VK4 478 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 NPLOC4Q8TAT6 608 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 RNF145Q96MT1 663 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 FETUBQ9UGM5 382 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 TRHDEQ9UKU6 1024 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 TIMM22Q9Y584 194 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 MAGEB16A2A368 324 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 MOXD2PA6NHM9 499 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 SH3BGRLO75368 114 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 PRKCGP05129 697 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ODC1P11926 461 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 SMPD1P17405 629 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 PSMA4P25789 261 aaKnown RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 PTPN9P43378 593 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 GSSP48637 474 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 PCID2Q5JVF3 399 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 CNSTQ6PJW8 725 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 LRRC52Q8N7C0 313 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ENDOVQ8N8Q3 282 aaKnown RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 FAM47BQ8NA70 645 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 MAPK15Q8TD08 544 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms