RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 E9PAM4 449 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 TXNDC9O14530 226 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 PPARGP37231 505 aaPredicted RBP13.02□□□□□ -0.32
HIF3A-204ENST00000300862 RANBP1P43487 201 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 GPR15P49685 360 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 WNT3AP56704 352 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 MRPS22P82650 360 aaKnown RBP13.02□□□□□ -0.32
HIF3A-204ENST00000300862 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.32
HIF3A-204ENST00000300862 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 ST13P4Q8IZP2 240 aaPredicted RBP13.02□□□□□ -0.32
HIF3A-204ENST00000300862 KDM1BQ8NB78 822 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 FAM156AQ8NDB6 213 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 RDH11Q8TC12 318 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 RSPH1Q8WYR4 309 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 JADE3Q92613 823 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 ADAM2Q99965 735 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 VCX3BQ9H321 246 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 VCX3AQ9NNX9 186 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 NSMCE4AQ9NXX6 385 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 IPO11Q9UI26 975 aaKnown RBP13.02□□□□□ -0.32
HIF3A-204ENST00000300862 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 CAPN8A6NHC0 703 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 PDLIM1O00151 329 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 PSMD3O43242 534 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 PABPC4LP0CB38 370 aaKnown RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 CD151P48509 253 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF135P52742 658 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 SLC12A2P55011 1212 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 GEMP55040 296 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 MS4A2Q01362 244 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 UGP2Q16851 508 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 LRRC23Q53EV4 343 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 MANEALQ5VSG8 457 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 IL31Q6EBC2 164 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 RANBP10Q6VN20 620 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 TRIM67Q6ZTA4 783 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 SPATA2LQ8IUW3 424 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 CNTN4Q8IWV2 1026 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 GPR152Q8TDT2 470 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 TMA16Q96EY4 203 aaKnown RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 OLFM1Q99784 485 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 NT5MQ9NPB1 228 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 TREX1Q9NSU2 369 aa13.02□□□□□ -0.33
HIF3A-204ENST00000300862 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF236Q9UL36 1845 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 J3KR12 359 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 AP3B1O00203 1094 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 GPR182O15218 404 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 B4GALT3O60512 393 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 MT-CO1P00395 513 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 PIM1P11309 404 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 AKR1A1P14550 325 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 TSPAN8P19075 237 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 RGS2P41220 211 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 CEACAM7Q14002 265 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 IHHQ14623 411 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 DDR2Q16832 855 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF354CQ86Y25 554 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 NAT14Q8WUY8 206 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 PHF21BQ96EK2 531 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 MRPL46Q9H2W6 279 aaKnown RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 GJB3O75712 270 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 CPB1P15086 417 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 CTGFP29279 349 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 HUNKP57058 714 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 GRM2Q14416 872 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 POTEHQ6S545 545 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 BNC2Q6ZN30 1099 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 PTAR1Q7Z6K3 402 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 SERINC5Q86VE9 423 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 KLHDC8BQ8IXV7 354 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 C2CD4AQ8NCU7 369 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
HIF3A-204ENST00000300862 CNDP1Q96KN2 507 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 ENTPD7Q9NQZ7 604 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 STK39Q9UEW8 545 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 Q9Y3F1 56 aa13.01□□□□□ -0.33
HIF3A-204ENST00000300862 OR51F1A6NGY5 319 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 TNFRSF10BO14763 440 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 OR6B1O95007 311 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 TBX18O95935 607 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 VCLP18206 1134 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 HDCP19113 662 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 CD86P42081 329 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 TSPY1Q01534 308 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms