RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 SEMA5AQ13591 1074 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 TAF5Q15542 800 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ANKS6Q68DC2 871 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 RFWD3Q6PCD5 774 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PRCCQ92733 491 aaPredicted RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PSMG2Q969U7 264 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 YY1AP1Q9H869 796 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ORC6Q9Y5N6 252 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 WDR90Q96KV7 1748 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 TRIM13O60858 407 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 USP1O94782 785 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 LTA4HP09960 611 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ZSCAN5DPP0CG00 497 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CXCR2P25025 360 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SSTR1P30872 391 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SPAM1P38567 509 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 NKX3-2P78367 333 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SLC25A11Q02978 314 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SLC8B1Q6J4K2 584 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 FBXL22Q6P050 247 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 FBXO39Q8N4B4 442 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 STARD8Q92502 1023 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ALG13Q9NP73 1137 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CASS4Q9NQ75 786 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 DCTN4Q9UJW0 460 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ANGPTL2Q9UKU9 493 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SRRM3A6NNA2 597 aaPredicted RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TEX28O15482 410 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 NBNO60934 754 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 DGKIO75912 1065 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 DSC1Q08554 894 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CSHL1Q14406 222 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 EIF4HQ15056 248 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 MS4A13Q5J8X5 152 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 PRPF39Q86UA1 669 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TNIP2Q8NFZ5 429 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 OR56A4Q8NGH8 313 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 OR10T2Q8NGX3 314 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CLEC4CQ8WTT0 213 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ASPSCR1Q9BZE9 553 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 WDR41Q9HAD4 459 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 VCX3AQ9NNX9 186 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 MLXIPLQ9NP71 852 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 FBXO5Q9UKT4 447 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 KANSL1LA0AUZ9 987 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 PDZK1P1A8MUH7 402 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 KITP10721 976 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ECT2LQ008S8 904 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 GALNT2Q10471 571 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 PTK2BQ14289 1009 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SMAD1Q15797 465 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CARD16Q5EG05 197 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 PAGE2BQ5JRK9 111 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 RAET1GQ6H3X3 334 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 BRAT1Q6PJG6 821 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 LPCAT2Q7L5N7 544 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ING5Q8WYH8 240 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TRMT2BQ96GJ1 504 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 LRIG1Q96JA1 1093 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 RHOJQ9H4E5 214 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 FAM107AO95990 144 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 OGNP20774 298 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 LSP1P33241 339 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ADAM17P78536 824 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 CACNG1Q06432 222 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TERF2Q15554 542 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 SPDYAQ5MJ70 313 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 BRSK1Q8TDC3 778 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 AUTS2Q8WXX7 1259 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 TSGA13Q96PP4 275 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 R3HDMLQ9H3Y0 253 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 FBRSQ9HAH7 460 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 HS3ST4Q9Y661 456 aa8.37□□□□□ -1.07
SNRPD1-201ENST00000300413 EDDM13A0A1B0GTR0 161 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 ANXA5P08758 320 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 CTSEP14091 401 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 ITGB6P18564 788 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 RAP1GDS1P52306 607 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 ATXN3P54252 364 aaPredicted RBP8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 STX5Q13190 355 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 SERINC3Q13530 473 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 RTP2Q5QGT7 225 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 C16orf89Q6UX73 402 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 ZNF567Q8N184 647 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 TCAIMQ8N3R3 496 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 TTC30BQ8N4P2 665 aa8.36□□□□□ -1.07
SNRPD1-201ENST00000300413 BAIAP2L1Q9UHR4 511 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms