RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 MYLIPQ8WY64 445 aa14.32□□□□□ -0.12
CDH16-201ENST00000299752 POLR1EQ9GZS1 481 aaKnown RBP14.32□□□□□ -0.12
CDH16-201ENST00000299752 OLFM2O95897 454 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 PRKCGP05129 697 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CEBPBP17676 345 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 SPRP35270 261 aaPredicted RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 RGRP47804 291 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 PDPK2PQ6A1A2 396 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CXorf57Q6NSI4 855 aaKnown RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 LSM7Q9UK45 103 aaKnown RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 A0A1B0GVM2 712 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 TCAF2A6NFQ2 919 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 PIRTP0C851 137 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 LIMK2P53671 638 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 OXCT1P55809 520 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CORO7P57737 925 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CDH18Q13634 790 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 C16orf46Q6P387 395 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 OTOAQ7RTW8 1153 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 YTHDF3Q7Z739 585 aaKnown RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 CMTM8Q8IZV2 173 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 GRAMD1AQ96CP6 724 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CAB39LQ9H9S4 337 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 MKS1Q9NXB0 559 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 MTO1Q9Y2Z2 717 aaKnown RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CCT8L1PA6NM43 557 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 BMP1P13497 986 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 SERPINH1P50454 418 aaKnown RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 ERVK-21P61565 698 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 TNK2Q07912 1038 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 SPRED3Q2MJR0 410 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 CCDC117Q8IWD4 279 aaPredicted RBP14.31□□□□□ -0.12
CDH16-201ENST00000299752 SMIM14Q96QK8 99 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 SNX15Q9NRS6 342 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 MAFFQ9ULX9 164 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 ARL2BPQ9Y2Y0 163 aa14.31□□□□□ -0.12
CDH16-201ENST00000299752 ATXN2Q99700 1313 aaKnown RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 K7ERQ8 282 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 HGSO14964 777 aaPredicted RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 RB1P06400 928 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ARNTP27540 789 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 CSKP41240 450 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 UBE3AQ05086 875 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 Q6ZNB5 142 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 MFN1Q8IWA4 741 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 APCDD1Q8J025 514 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ACVR1CQ8NER5 493 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 VN1R2Q8NFZ6 395 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ACMSDQ8TDX5 336 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 CCT6BQ92526 530 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 USP13Q92995 863 aaPredicted RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ILVBLA1L0T0 632 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 BUD23O43709 281 aaKnown RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 KDELR3O43731 214 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 MT-CO1P00395 513 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ARCN1P48444 511 aaKnown RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 SCNN1BP51168 640 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 OVGP1Q12889 678 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 CTBP1Q13363 440 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 DENND6AQ8IWF6 608 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 OR6K2Q8NGY2 324 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 PTCD2Q8WV60 388 aaKnown RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 ZNF707Q96C28 371 aaPredicted RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 NSMCE3Q96MG7 304 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ZNF599Q96NL3 588 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 TREX1Q9NSU2 369 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
CDH16-201ENST00000299752 UBA2Q9UBT2 640 aaPredicted RBP14.3□□□□□ -0.12
CDH16-201ENST00000299752 MYO1CO00159 1063 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 CCL22O00626 93 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 TRIM24O15164 1050 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 WEE1P30291 646 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 DLG2Q15700 870 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
CDH16-201ENST00000299752 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 CHST9Q7L1S5 443 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 TRPM8Q7Z2W7 1104 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 SETD3Q86TU7 594 aaPredicted RBP14.29□□□□□ -0.12
CDH16-201ENST00000299752 TADA1Q96BN2 335 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 VPS39Q96JC1 886 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
CDH16-201ENST00000299752 RETREG1Q9H6L5 497 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 KLHL14Q9P2G3 628 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 TBC1D30Q9Y2I9 924 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
CDH16-201ENST00000299752 WNT6Q9Y6F9 365 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 BNIP3LO60238 219 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 SLC4A1P02730 911 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 SAT1P21673 171 aa14.29□□□□□ -0.12
CDH16-201ENST00000299752 SLC7A9P82251 487 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms