RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ZNF280BQ86YH2 543 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 TRPA1O75762 1119 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 IGLV3-25P01717 112 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 RBP1P09455 135 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 PMLP29590 882 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 GPR15P49685 360 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 DSC2Q02487 901 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 SLC10A7Q0GE19 358 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 FLOT2Q14254 428 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 TMEM198Q66K66 360 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 DENND5AQ6IQ26 1287 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 RANBP10Q6VN20 620 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 KIAA0408Q6ZU52 694 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 BBS5Q8N3I7 341 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 CEP70Q8NHQ1 597 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 BLOC1S5Q8TDH9 187 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 RCN3Q96D15 328 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 NEMP2A6NFY4 417 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 J3KR12 359 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 CLCN5P51795 746 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 ATXN3P54252 364 aaPredicted RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 POLD3Q15054 466 aaPredicted RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 RNF180Q86T96 592 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 RNF148Q8N7C7 305 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 ADA2Q9NZK5 511 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 UXTQ9UBK9 157 aaPredicted RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 TBX18O95935 607 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 ZCCHC18P0CG32 403 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 TSTD2Q5T7W7 516 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 SLC24A5Q71RS6 500 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 C2CD4AQ8NCU7 369 aaPredicted RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 USP13Q92995 863 aaPredicted RBP13.73□□□□□ -0.21
CDH8-201ENST00000299345 HDAC10Q969S8 669 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 PSMG2Q969U7 264 aa13.73□□□□□ -0.21
CDH8-201ENST00000299345 CCL22O00626 93 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 STAMBPO95630 424 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 OR1E1P30953 314 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 NDST2P52849 883 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 MED21Q13503 144 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 DSC3Q14574 896 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 RBM20Q5T481 1227 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 OR6Y1Q8NGX8 325 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 GDPD5Q8WTR4 605 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 C1QTNF1Q9BXJ1 281 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 MRPL1Q9BYD6 325 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 KLHL4Q9C0H6 718 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 TNFRSF10BO14763 440 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CACNG3O60359 315 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 SUPT7LO94864 414 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 SORBS2O94875 1100 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 DNAJB1P25685 340 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 ARCN1P48444 511 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 PKNOX1P55347 436 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 DSELQ8IZU8 1212 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PAF1Q8N7H5 531 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 MRM3Q9HC36 420 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 TLR8Q9NR97 1041 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 SCML2Q9UQR0 700 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CRYL1Q9Y2S2 319 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 TMEM233B4DJY2 109 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CNTN5O94779 1100 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 ELNP15502 786 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 TCN1P20061 433 aaPredicted RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 GLDCP23378 1020 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PRKCZQ05513 592 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 LPCAT4Q643R3 524 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CNTN4Q8IWV2 1026 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 FUBP3Q96I24 572 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDH8-201ENST00000299345 FAR2Q96K12 515 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 C1orf74Q96LT6 269 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
CDH8-201ENST00000299345 VWA7Q9Y334 891 aa13.72□□□□□ -0.21
CDH8-201ENST00000299345 TTC24A2A3L6 582 aaPredicted RBP13.71□□□□□ -0.21
CDH8-201ENST00000299345 AURKAO14965 403 aa13.71□□□□□ -0.21
CDH8-201ENST00000299345 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms