RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 C1orf74Q96LT6 269 aa21.42■■□□□ 1.02
SMCO4-201ENST00000298966 FCRL3Q96P31 734 aaPredicted RBP21.42■■□□□ 1.02
SMCO4-201ENST00000298966 KCTD15Q96SI1 283 aaPredicted RBP21.42■■□□□ 1.02
SMCO4-201ENST00000298966 DONSONQ9NYP3 566 aa21.42■■□□□ 1.02
SMCO4-201ENST00000298966 PLA2G4CQ9UP65 541 aa21.42■■□□□ 1.02
SMCO4-201ENST00000298966 A0A1B0GTQ1 180 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 TLX3O43711 291 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 RFPL3O75679 317 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 LDOC1O95751 146 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 IGLV3-27P01718 113 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 CD48P09326 243 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 IL4RP24394 825 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 VSNL1P62760 191 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 DR1Q01658 176 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 CA9Q16790 459 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 TTC31Q49AM3 519 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 UNC45BQ8IWX7 931 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 IFT20Q8IY31 132 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 CCHCR1Q8TD31 782 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 P3H4Q92791 437 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 CSPG4P5Q96PW8 444 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 HERPUD2Q9BSE4 406 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 ACE2Q9BYF1 805 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 SGK2Q9HBY8 427 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 GPATCH2LQ9NWQ4 482 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 SFMBT1Q9UHJ3 866 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 DMGDHQ9UI17 866 aaKnown RBP21.41■■□□□ 1.02
SMCO4-201ENST00000298966 RAI2Q9Y5P3 530 aa21.41■■□□□ 1.02
SMCO4-201ENST00000298966 KCNU1A8MYU2 1149 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 EEF2KO00418 725 aaKnown RBP21.4■■□□□ 1.02
SMCO4-201ENST00000298966 HEXIM1O94992 359 aaKnown RBP21.4■■□□□ 1.02
SMCO4-201ENST00000298966 C1SP09871 688 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 C7P10643 843 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 WFIKKN2Q8TEU8 576 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 AZIN2Q96A70 460 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 SKA1Q96BD8 255 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 PLD4Q96BZ4 506 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 CNDP2Q96KP4 475 aaKnown RBP21.4■■□□□ 1.02
SMCO4-201ENST00000298966 BTN2A3PQ96KV6 586 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 TMEM245Q9H330 911 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 RETREG1Q9H6L5 497 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 GDF3Q9NR23 364 aa21.4■■□□□ 1.02
SMCO4-201ENST00000298966 UTP11Q9Y3A2 253 aaKnown RBP21.4■■□□□ 1.02
SMCO4-201ENST00000298966 MYLKQ15746 1914 aa21.39■■□□□ 1.02
SMCO4-201ENST00000298966 TENM4Q6N022 2769 aa21.39■■□□□ 1.02
SMCO4-201ENST00000298966 SLC12A8A0AV02 714 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 NDC80O14777 642 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 MCF2LO15068 1137 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 VILLO15195 856 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 FGF10O15520 208 aaPredicted RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 LIASO43766 372 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 ECEL1O95672 775 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 ITGAVP06756 1048 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 CLCN6P51797 869 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 TPI1P60174 286 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 RPS14P62263 151 aaKnown RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 RACK1P63244 317 aaKnown RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 XRCC4Q13426 336 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 MPPE1Q53F39 396 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 GATAD2AQ86YP4 633 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 ZNF843Q8N446 348 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 ZNF366Q8N895 744 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 PCDH19Q8TAB3 1148 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 SLC35B2Q8TB61 432 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 CYB5D2Q8WUJ1 264 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 HAUS1Q96CS2 278 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 FCRL2Q96LA5 508 aaPredicted RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 ELF4Q99607 663 aaPredicted RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 FAM129AQ9BZQ8 928 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 CWC15Q9P013 229 aaKnown RBP21.39■■□□□ 1.01
SMCO4-201ENST00000298966 OR12D3Q9UGF7 316 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 AMACRQ9UHK6 382 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 PLXNA2O75051 1894 aa21.39■■□□□ 1.01
SMCO4-201ENST00000298966 CFAP69A5D8W1 941 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 SERPINB6P35237 376 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 PTGIRP43119 386 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 DRG2P55039 364 aaKnown RBP21.38■■□□□ 1.01
SMCO4-201ENST00000298966 CLDN6P56747 220 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 SLC7A5Q01650 507 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 TARDBPQ13148 414 aaKnown RBP eCLIP21.38■■□□□ 1.011e-12■■■■□ 24.7
SMCO4-201ENST00000298966 MMRN1Q13201 1228 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 RTP5Q14D33 572 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 NOMO1Q15155 1222 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 MAP9Q49MG5 647 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 KIAA0895LQ68EN5 471 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 RFX8Q6ZV50 586 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 CHST9Q7L1S5 443 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 GPR155Q7Z3F1 870 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 FAM217AQ8IXS0 508 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 PQLC3Q8N755 202 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 ACTL9Q8TC94 416 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 C1orf54Q8WWF1 131 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 SEC14L1Q92503 715 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 NRSN2Q9GZP1 204 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 PRSS16Q9NQE7 514 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 NCKAP1Q9Y2A7 1128 aa21.38■■□□□ 1.01
SMCO4-201ENST00000298966 TEX51A0A1B0GUA7 166 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 CBX4O00257 560 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 DAPK3O43293 454 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms