RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SPERTQ8NA61 448 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 FAM98AQ8NCA5 519 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 FAM126AQ9BYI3 521 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TRHDEQ9UKU6 1024 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GMPPBQ9Y5P6 360 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ABCC6O95255 1503 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ATP6V1G1O75348 118 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 IGSF6O95976 241 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 NFKB1P19838 968 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 NPR2P20594 1047 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MSR1P21757 451 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SQLEQ14534 574 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 KCNA10Q16322 511 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RPTNQ6XPR3 784 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 C15orf40Q8WUR7 153 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PGM2Q96G03 612 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 VPS35Q96QK1 796 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 NDNQ99608 321 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SMURF2Q9HAU4 748 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SLC35C2Q9NQQ7 365 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 BARX2Q9UMQ3 279 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 HACD1B0YJ81 288 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 UBE2Q2LH0YL09 131 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CLUP10909 449 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RORAP35398 523 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PTPN11Q06124 597 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CBX3Q13185 183 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 LGI2Q8N0V4 545 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 POC5Q8NA72 575 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CRISPLD1Q9H336 500 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ALG9Q9H6U8 611 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 KLQ9UEF7 1012 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TIMM13Q9Y5L4 95 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 OR14I1A6ND48 311 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 FFAR3O14843 346 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GPR42O15529 346 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SCGNO76038 276 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CAMTA2O94983 1202 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PIGNO95427 931 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GNRH1P01148 92 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SHBGP04278 402 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TSHRP16473 764 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 NDST1P52848 882 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 FCGRTP55899 365 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 EN1Q05925 392 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 EML3Q32P44 896 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GCNT7Q6ZNI0 430 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PRKD2Q9BZL6 878 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 BHLHE41Q9C0J9 482 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SOHLH2Q9NX45 425 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MAT2BQ9NZL9 334 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ARHGAP20Q9P2F6 1191 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DNPEPQ9ULA0 475 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 VPS4AQ9UN37 437 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF232Q9UNY5 417 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GAKO14976 1311 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TRIM64A6NGJ6 449 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TRIM64BA6NI03 449 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 STX16-NPEPL1H3BU86 382 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 STX16O14662 325 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GJB6O95452 261 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RPL4P36578 427 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MMP13P45452 471 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CEBPGP53567 150 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SLC25A3Q00325 362 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TTC7BQ86TV6 843 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 COLGALT2Q8IYK4 626 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SLC5A5Q92911 643 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ASB2Q96Q27 587 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RABL2AQ9UBK7 228 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RAB21Q9UL25 225 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RABL2BQ9UNT1 228 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ANGPT4Q9Y264 503 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 A0A0X1KG70 313 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 KLHL33A6NCF5 533 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CDC40O60508 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ARP10275 920 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ETS2P15036 469 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PAX3P23760 479 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MTA1Q13330 715 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MIIPQ5JXC2 388 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF280DQ6N043 979 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TTI2Q6NXR4 508 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF720Q7Z2F6 126 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DNAJB7Q7Z6W7 309 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 LHFPL3Q86UP9 236 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MREGQ8N565 214 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DNAJC1Q96KC8 554 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 XKR8Q9H6D3 395 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CACNA1FO60840 1977 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 KCNK1O00180 336 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZBTB14O43829 449 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 HMGCRP04035 888 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PTDSS1P48651 473 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TTMPQ5BVD1 217 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 FBXO47Q5MNV8 452 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DENND5AQ6IQ26 1287 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TMC7Q7Z402 723 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 AGO4Q9HCK5 861 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms