RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CACNA2D2Q9NY47 1150 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 LHX3Q9UBR4 397 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 VPS28Q9UK41 221 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 HS3ST2Q9Y278 367 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 JRKLQ9Y4A0 524 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 RAD54BQ9Y620 910 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 LRP4O75096 1905 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 CABIN1Q9Y6J0 2220 aa6.01□□□□□ -1.45
SSX3-201ENST00000298396 DNAH14Q0VDD8 3507 aa6□□□□□ -1.45
SSX3-201ENST00000298396 GOLGA6L9A6NEM1 432 aa6□□□□□ -1.45
SSX3-201ENST00000298396 CHURC1-FNTBB4DL54 471 aa6□□□□□ -1.45
SSX3-201ENST00000298396 APOC4-APOC2K7ER74 178 aa6□□□□□ -1.45
SSX3-201ENST00000298396 K7ESF4 209 aa6□□□□□ -1.45
SSX3-201ENST00000298396 CBX4O00257 560 aa6□□□□□ -1.45
SSX3-201ENST00000298396 DFFAO00273 331 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PDE2AO00408 941 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 KCNK3O14649 394 aa6□□□□□ -1.45
SSX3-201ENST00000298396 DAPK3O43293 454 aa6□□□□□ -1.45
SSX3-201ENST00000298396 KIF5CO60282 957 aa6□□□□□ -1.45
SSX3-201ENST00000298396 APOC2P02655 101 aa6□□□□□ -1.45
SSX3-201ENST00000298396 CTSLP07711 333 aa6□□□□□ -1.45
SSX3-201ENST00000298396 SRPRAP08240 638 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 EDN3P14138 238 aa6□□□□□ -1.45
SSX3-201ENST00000298396 POLR2EP19388 210 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 TGM2P21980 687 aa6□□□□□ -1.45
SSX3-201ENST00000298396 NTSR1P30989 418 aa6□□□□□ -1.45
SSX3-201ENST00000298396 GARSP41250 739 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 SERPINH1P50454 418 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 METAP1P53582 386 aa6□□□□□ -1.45
SSX3-201ENST00000298396 COPAP53621 1224 aa6□□□□□ -1.45
SSX3-201ENST00000298396 OXCT1P55809 520 aa6□□□□□ -1.45
SSX3-201ENST00000298396 YBEYP58557 167 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 GNG11P61952 73 aa6□□□□□ -1.45
SSX3-201ENST00000298396 MRPS21P82921 87 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 OTUD4Q01804 1114 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 SATB1Q01826 763 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PPIDQ08752 370 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 DMWDQ09019 674 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ZBTB17Q13105 803 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 NOMO1Q15155 1222 aa6□□□□□ -1.45
SSX3-201ENST00000298396 FBXO43Q4G163 708 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ZFYVE27Q5T4F4 411 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ATXN7L2Q5T6C5 722 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 C9orf64Q5T6V5 341 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PAPD7Q5XG87 772 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 C22orf39Q6P5X5 142 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ADAT2Q7Z6V5 191 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 SLC13A5Q86YT5 568 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 CCDC50Q8IVM0 306 aa6□□□□□ -1.45
SSX3-201ENST00000298396 MAP7D3Q8IWC1 876 aa6□□□□□ -1.45
SSX3-201ENST00000298396 SYNPOQ8N3V7 929 aa6□□□□□ -1.45
SSX3-201ENST00000298396 RASGEF1CQ8N431 466 aa6□□□□□ -1.45
SSX3-201ENST00000298396 SVOPQ8N4V2 548 aa6□□□□□ -1.45
SSX3-201ENST00000298396 FBXL6Q8N531 539 aa6□□□□□ -1.45
SSX3-201ENST00000298396 LZTR1Q8N653 840 aa6□□□□□ -1.45
SSX3-201ENST00000298396 UBL4BQ8N7F7 174 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ZNF557Q8N988 423 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 CHST14Q8NCH0 376 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ACTL9Q8TC94 416 aa6□□□□□ -1.45
SSX3-201ENST00000298396 ATG4AQ8WYN0 398 aa6□□□□□ -1.45
SSX3-201ENST00000298396 MAML1Q92585 1016 aa6□□□□□ -1.45
SSX3-201ENST00000298396 CCDC74AQ96AQ1 378 aa6□□□□□ -1.45
SSX3-201ENST00000298396 NSUN5Q96P11 429 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 TSGA13Q96PP4 275 aa6□□□□□ -1.45
SSX3-201ENST00000298396 QKIQ96PU8 341 aaKnown RBP eCLIP6□□□□□ -1.45
SSX3-201ENST00000298396 OSBPL9Q96SU4 736 aa6□□□□□ -1.45
SSX3-201ENST00000298396 BHLHE41Q9C0J9 482 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 CARD9Q9H257 536 aa6□□□□□ -1.45
SSX3-201ENST00000298396 MFSD1Q9H3U5 465 aa6□□□□□ -1.45
SSX3-201ENST00000298396 CD93Q9NPY3 652 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PRSS16Q9NQE7 514 aa6□□□□□ -1.45
SSX3-201ENST00000298396 PRMT8Q9NR22 394 aaPredicted RBP6□□□□□ -1.45
SSX3-201ENST00000298396 IPO11Q9UI26 975 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 MMP17Q9ULZ9 603 aa6□□□□□ -1.45
SSX3-201ENST00000298396 SNX12Q9UMY4 172 aa6□□□□□ -1.45
SSX3-201ENST00000298396 EFR3BQ9Y2G0 817 aa6□□□□□ -1.45
SSX3-201ENST00000298396 MRPS17Q9Y2R5 130 aaKnown RBP6□□□□□ -1.45
SSX3-201ENST00000298396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6□□□□□ -1.45
SSX3-201ENST00000298396 SIT1Q9Y3P8 196 aa6□□□□□ -1.45
SSX3-201ENST00000298396 HEY1Q9Y5J3 304 aa6□□□□□ -1.45
SSX3-201ENST00000298396 STON1Q9Y6Q2 735 aa6□□□□□ -1.45
SSX3-201ENST00000298396 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
SSX3-201ENST00000298396 CXorf51AA0A1B0GTR3 108 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 ARHGAP42A6NI28 874 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 INSIG1O15503 277 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 TIMM44O43615 452 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 TMCC1O94876 653 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 PAPSS2O95340 614 aaPredicted RBP5.99□□□□□ -1.45
SSX3-201ENST00000298396 FGGP02679 453 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 ASLP04424 464 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 HLA-DQB2P05538 268 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 CR2P20023 1033 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 ALAS2P22557 587 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 GKP32189 559 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 CD68P34810 354 aaPredicted RBP5.99□□□□□ -1.45
SSX3-201ENST00000298396 SERPINB6P35237 376 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 DEKP35659 375 aaKnown RBP5.99□□□□□ -1.45
SSX3-201ENST00000298396 ETFBP38117 255 aa5.99□□□□□ -1.45
SSX3-201ENST00000298396 CLCN5P51795 746 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms