RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LRRTM3Q86VH5 581 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 ARHGAP18Q8N392 663 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 RDH11Q8TC12 318 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 SMARCD1Q96GM5 515 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 SLC45A3Q96JT2 553 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 UBE2OQ9C0C9 1292 aaKnown RBP24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 GIMAP2Q9UG22 337 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 OR51F1A6NGY5 319 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 THP07101 528 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 CRYBB1P53674 252 aaPredicted RBP24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 PSME3P61289 254 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 CDC42EP1Q00587 391 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 ITKQ08881 620 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 CYTH1Q15438 398 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 PLEKHH3Q7Z736 793 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 ANKRD49Q8WVL7 239 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 MPP4Q96JB8 637 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 KLHL5Q96PQ7 755 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 NCKIPSDQ9NZQ3 722 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 CPA4Q9UI42 421 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 NEU3Q9UQ49 428 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 AAR2Q9Y312 384 aaKnown RBP24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 TCAF1Q9Y4C2 921 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 ACOT8O14734 319 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 CD151P48509 253 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 AIF1P55008 147 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 ARMC3Q5W041 872 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 BTBD8Q5XKL5 378 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 TFAP2DQ7Z6R9 452 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 C14orf80Q86SX3 495 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 LRTOMTQ8WZ04 291 aa24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 DDX18Q9NVP1 670 aaKnown RBP24.61■■□□□ 1.53
SPTSSA-201ENST00000298130 B3GAT3O94766 335 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 F9P00740 461 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 CCDC166P0CW27 439 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 CPB1P15086 417 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 FRG1Q14331 258 aaKnown RBP24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 LDLRAD1Q5T700 205 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 ZNF467Q7Z7K2 595 aaPredicted RBP24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 AMIGO2Q86SJ2 522 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 MARVELD2Q8N4S9 558 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 SPPL2BQ8TCT7 592 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 PGAP3Q96FM1 320 aaPredicted RBP24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 FCRL2Q96LA5 508 aaPredicted RBP24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 MRGPRX2Q96LB1 330 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 ARHGEF38Q9NXL2 777 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 VTI1BQ9UEU0 232 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 RAD54BQ9Y620 910 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 BCAS2O75934 225 aaPredicted RBP24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 LHX1P48742 406 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 SDHAF4Q5VUM1 108 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 NEPROQ6NW34 567 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 GRIN3AQ8TCU5 1115 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 IL1RL2Q9HB29 575 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 IGSF5Q9NSI5 407 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 ST3GAL5Q9UNP4 418 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 PCDHGA7Q9Y5G6 932 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 PTGDR2Q9Y5Y4 395 aa24.6■■□□□ 1.53
SPTSSA-201ENST00000298130 INTS6LQ5JSJ4 861 aaKnown RBP24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 CEP70Q8NHQ1 597 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 MRPL1Q9BYD6 325 aaKnown RBP24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 FAM105AQ9NUU6 356 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 ARL5CA6NH57 179 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 FBP2O00757 339 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 GJB3O75712 270 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 KCNC1P48547 511 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 CDH13P55290 713 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 C9orf131Q5VYM1 1079 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 PIM3Q86V86 326 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 RYBPQ8N488 228 aaPredicted RBP24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 CASP10Q92851 521 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 EME1Q96AY2 570 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 C17orf102A2RUQ5 167 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 VILLO15195 856 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 DENRO43583 198 aaKnown RBP24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 OR4Q2P0C623 313 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 SOX11P35716 441 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 UGP2Q16851 508 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 PRICKLE1Q96MT3 831 aaPredicted RBP24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 FCRL5Q96RD9 977 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 CCDC28BQ9BUN5 200 aa24.59■■□□□ 1.53
SPTSSA-201ENST00000298130 PDCD11Q14690 1871 aaKnown RBP24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 A8MT66 165 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 PPP6CO00743 305 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 SLC4A1P02730 911 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 HADHAP40939 763 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 PTPRCAPQ14761 206 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 FBXO48Q5FWF7 155 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 OR10T2Q8NGX3 314 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 NCSTNQ92542 709 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 KCTD3Q9Y597 815 aa24.58■■□□□ 1.53
SPTSSA-201ENST00000298130 PRSS51A0A1B0GVH4 220 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 C7orf72A4D263 438 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 PRORSD1PA6NEY8 169 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 RPL10P27635 214 aaKnown RBP24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 LSAMPQ13449 338 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 FASTKQ14296 549 aaKnown RBP24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 CUZD1Q86UP6 607 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 ZNF354CQ86Y25 554 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 TMEM102Q8N9M5 508 aaPredicted RBP24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms