RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 NOMO1Q15155 1222 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 TLDC1Q6P9B6 456 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 APBB2Q92870 758 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 MIPEPQ99797 713 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 AASDHPPTQ9NRN7 309 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 A0A0G2JLL6 359 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 TGDSO95455 350 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 LDLRP01130 860 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 MAGP20916 626 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CD151P48509 253 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 ACOX1Q15067 660 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PITRM1Q5JRX3 1037 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 DCLRE1AQ6PJP8 1040 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CEP68Q76N32 757 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 GET4Q7L5D6 327 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 TRIM74Q86UV6 250 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 NAT16Q8N8M0 369 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 FIG4Q92562 907 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 NDRG1Q92597 394 aaKnown RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 EPB41L4BQ9H329 900 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 NDUFS2O75306 463 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 MPOP05164 745 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CTSEP14091 401 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 IL1R2P27930 398 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 SAMD4BQ5PRF9 694 aaKnown RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 BBS2Q9BXC9 721 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 A0A1B0GVG6 124 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 LAG3P18627 525 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 GLUD2P49448 558 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 RENBPP51606 427 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 ACLYP53396 1101 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CERCAMQ5T4B2 595 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 RAP1GAP2Q684P5 730 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 TBCDQ9BTW9 1192 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 SELENONQ9NZV5 590 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 COPG2Q9UBF2 871 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 TMA7Q9Y2S6 64 aaKnown RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 IL1BP01584 269 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 OR4Q2P0C623 313 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CDH17Q12864 832 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 HIST2H2AA3Q6FI13 130 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 NDEL1Q9GZM8 345 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 POPDC2Q9HBU9 364 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 MAP10Q9P2G4 905 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CLUHO75153 1309 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 IFRD1O00458 451 aaPredicted RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 BIRC5O15392 142 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 TCEA3O75764 348 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 CRHR1P34998 444 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 LPIN1Q14693 890 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 NR1D2Q14995 579 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 SFT2D3Q587I9 215 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 OTULINQ96BN8 352 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 NSMCE2Q96MF7 247 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 ALG9Q9H6U8 611 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 RAP1GDS1P52306 607 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 PRKD1Q15139 912 aaPredicted RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 C2orf49Q9BVC5 232 aaPredicted RBP13.54□□□□□ -0.24
HPS3-201ENST00000296051 CDH19Q9H159 772 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 SCN3BQ9NY72 215 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 KIF1AQ12756 1690 aa13.54□□□□□ -0.24
HPS3-201ENST00000296051 TK2O00142 265 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 PLIN3O60664 434 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 VPS26AO75436 327 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 KATNA1O75449 491 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CRTAMO95727 393 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ATXN1P54253 815 aaKnown RBP13.53□□□□□ -0.24
HPS3-201ENST00000296051 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
HPS3-201ENST00000296051 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms