RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CKMT1AP12532 417 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 TIMP2P16035 220 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 TNFAIP3P21580 790 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 EIF2B5Q13144 721 aaKnown RBP25.55■■□□□ 1.68
U2AF1-201ENST00000291552 PDE1CQ14123 709 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-201ENST00000291552 RTP5Q14D33 572 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 CYP4V2Q6ZWL3 525 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-201ENST00000291552 CACTIN-AS1Q8N1I8 211 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 CENPTQ96BT3 561 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 VCPIP1Q96JH7 1222 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 APOLD1Q96LR9 279 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 BPIFA3Q9BQP9 254 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 CATSPERBQ9H7T0 1116 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 AP4E1Q9UPM8 1137 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 MMP20O60882 483 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 PIGNO95427 931 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 CCDC172P0C7W6 258 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 TPI1P60174 286 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 HNRNPKP61978 463 aaKnown RBP eCLIP25.54■■□□□ 1.68
U2AF1-201ENST00000291552 CRELD1Q96HD1 420 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 NRSN2Q9GZP1 204 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 DKK3Q9UBP4 350 aa25.54■■□□□ 1.68
U2AF1-201ENST00000291552 J3KR12 359 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 PSMA2P25787 234 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 ZNF571Q7Z3V5 609 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 TTC7BQ86TV6 843 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 VPS36Q86VN1 386 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 FAM181AQ8N9Y4 354 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 TP53I13Q8NBR0 393 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 ARHGEF26Q96DR7 871 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 CELF6Q96J87 481 aaKnown RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 KCTD15Q96SI1 283 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 SNRNP25Q9BV90 132 aaKnown RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 TCEAL2Q9H3H9 227 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 MBNL1Q9NR56 388 aaKnown RBP25.53■■□□□ 1.68
U2AF1-201ENST00000291552 CLCA2Q9UQC9 943 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 BPTFQ12830 3046 aa25.53■■□□□ 1.68
U2AF1-201ENST00000291552 KIF26BQ2KJY2 2108 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 TSPAN11A1L157 253 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 ALPPL2P10696 532 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 HTR7P34969 479 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 E2F1Q01094 437 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 SEMG2Q02383 582 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 ASIC2Q16515 512 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 CDCP2Q5VXM1 449 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 RBFAQ8N0V3 343 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 WRAP53Q9BUR4 548 aaKnown RBP25.52■■□□□ 1.68
U2AF1-201ENST00000291552 CPEB1Q9BZB8 566 aaKnown RBP25.52■■□□□ 1.68
U2AF1-201ENST00000291552 HAUS4Q9H6D7 363 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 PARVAQ9NVD7 372 aa25.52■■□□□ 1.68
U2AF1-201ENST00000291552 UBA2Q9UBT2 640 aaPredicted RBP25.52■■□□□ 1.68
U2AF1-201ENST00000291552 TMEM191CA6NGB0 347 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 DDX3XO00571 662 aaKnown RBP eCLIP25.51■■□□□ 1.67
U2AF1-201ENST00000291552 OPA1O60313 960 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 PRAMEF11O60813 436 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 MT-CO3P00414 261 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 RGRP47804 291 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 RAD51Q06609 339 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 HS1BP3Q53T59 392 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 ARHGAP12Q8IWW6 846 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 NAP1L5Q96NT1 182 aaPredicted RBP25.51■■□□□ 1.67
U2AF1-201ENST00000291552 NAT10Q9H0A0 1025 aaKnown RBP25.51■■□□□ 1.67
U2AF1-201ENST00000291552 DHX35Q9H5Z1 703 aaKnown RBP25.51■■□□□ 1.67
U2AF1-201ENST00000291552 PCSK1NQ9UHG2 260 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 PCDHB1Q9Y5F3 818 aa25.51■■□□□ 1.67
U2AF1-201ENST00000291552 NEMP2A6NFY4 417 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 BUB1BO60566 1050 aaPredicted RBP25.5■■□□□ 1.67
U2AF1-201ENST00000291552 JUNDP17535 347 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 PRKCIP41743 596 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 NDST2P52849 883 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 TMEM52BQ4KMG9 183 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 AFMIDQ63HM1 303 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 ZSWIM9Q86XI8 627 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 NPWQ8N729 165 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 CXorf40AQ8TE69 158 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 DCBLD2Q96PD2 775 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 SLC39A8Q9C0K1 460 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 AIPL1Q9NZN9 384 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 IPO11Q9UI26 975 aaKnown RBP25.5■■□□□ 1.67
U2AF1-201ENST00000291552 COQ6Q9Y2Z9 468 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 AK5Q9Y6K8 562 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 CSNK1G3Q9Y6M4 447 aa25.5■■□□□ 1.67
U2AF1-201ENST00000291552 SHROOM3Q8TF72 1996 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 A0A1B0GTH6 734 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 H3BM21 787 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 EEF2KO00418 725 aaKnown RBP25.49■■□□□ 1.67
U2AF1-201ENST00000291552 AQP9O43315 295 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 BRINP1O60477 761 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 TM7SF2O76062 418 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 PAPOLAP51003 745 aaKnown RBP25.49■■□□□ 1.67
U2AF1-201ENST00000291552 IRF4Q15306 451 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 KLHL40Q2TBA0 621 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 DEFB133Q30KQ1 61 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 PPP1R2P3Q6NXS1 205 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 FUCA2Q9BTY2 467 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 DUSP23Q9BVJ7 150 aa25.49■■□□□ 1.67
U2AF1-201ENST00000291552 A0A1W2PQC6 194 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 GCATO75600 419 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 FTLP02792 175 aaPredicted RBP25.48■■□□□ 1.67
U2AF1-201ENST00000291552 ITPKBP27987 946 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms