RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MSX2P35548 267 aaPredicted RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SERPINH1P50454 418 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 RHOAP61586 193 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 MGAT5Q09328 741 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 LRRC74AQ0VAA2 488 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CARTPTQ16568 116 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ACSBG2Q5FVE4 666 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 NOP9Q86U38 636 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 TRPC4APQ8TEL6 797 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 PRKAG3Q9UGI9 489 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GPC6Q9Y625 555 aaPredicted RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 PAPPA2Q9BXP8 1791 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CCL16O15467 120 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ALDH1A2O94788 518 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CLCNKBP51801 687 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ENPEPQ07075 957 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ZNF846Q147U1 533 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 AGAP9Q5VTM2 703 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 BROXQ5VW32 411 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ABRAXAS1Q6UWZ7 409 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 PACS1Q6VY07 963 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 KYAT3Q6YP21 454 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CMTR2Q8IYT2 770 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SUN5Q8TC36 379 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ACBD6Q9BR61 282 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 RPRD1BQ9NQG5 326 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GNEQ9Y223 722 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM20BO75063 409 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ZBTB11O95625 1053 aaPredicted RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CREB1P16220 341 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 DUSP4Q13115 394 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC1A5Q15758 541 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ZIK1Q3SY52 487 aaPredicted RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 FNDC3BQ53EP0 1204 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SVOPQ8N4V2 548 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ENKURQ8TC29 256 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 TFB1MQ8WVM0 346 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 TUBGCP5Q96RT8 1024 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 TBCBQ99426 244 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 DZANK1Q9NVP4 752 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 F8VP50 259 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 ALOX5P09917 674 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GRIA3P42263 894 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 C6orf89Q6UWU4 347 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 AKAP14Q86UN6 197 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM35AQ86V20 835 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 LZTR1Q8N653 840 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 LNX1Q8TBB1 728 aaPredicted RBP11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 RXFP2Q8WXD0 754 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SEMA4DQ92854 862 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 CITED4Q96RK1 184 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GANQ9H2C0 597 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 LRRC40Q9H9A6 602 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GPATCH2LQ9NWQ4 482 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC17A7Q9P2U7 560 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 TBX10O75333 385 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 ANXA9O76027 345 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 MYO1DO94832 1006 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 PEX2P28328 305 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 ADAM17P78536 824 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 INTS6LQ5JSJ4 861 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 EMC1Q8N766 993 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 TRIM54Q9BYV2 358 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 MAN1C1Q9NR34 630 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 TPRKBQ9Y3C4 175 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 NRP1O14786 923 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 NFATC1O95644 943 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 SPATA31D3P0C874 917 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 CDC16Q13042 620 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM98BQ52LJ0 330 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 SGO1Q5FBB7 561 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 PDZK1Q5T2W1 519 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 KLHL17Q6TDP4 642 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 SPATA31D4Q6ZUB0 917 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 LGI2Q8N0V4 545 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 GPATCH1Q9BRR8 931 aaKnown RBP11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC4A5Q9BY07 1137 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 NR2E1Q9Y466 385 aa11.46□□□□□ -0.57
NPC1L1-201ENST00000289547 MAGEC1O60732 1142 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 SLC5A3P53794 718 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms