RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 PABPC4LP0CB38 370 aaKnown RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 SLC2A1P11166 492 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 ZNF35P13682 527 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 EGR1P18146 543 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 RPS6KB1P23443 525 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 SLC7A1P30825 629 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 DNAJA1P31689 397 aaKnown RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 RHOAP61586 193 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 RPS15P62841 145 aaKnown RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 NOMO3P69849 1222 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 GPSM2P81274 684 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 DR1Q01658 176 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 MTAPQ13126 283 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 NOGQ13253 232 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 MYBPC3Q14896 1274 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 RARS2Q5T160 578 aaKnown RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 MLIPQ5VWP3 458 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 REP15Q6BDI9 236 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 PGAM4Q8N0Y7 254 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 CATSPER1Q8NEC5 780 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 RAB39BQ96DA2 213 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 MRPL4Q9BYD3 311 aaKnown RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 ANKZF1Q9H8Y5 726 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 MARCOQ9UEW3 520 aaPredicted RBP4.42□□□□□ -1.7
NCOA1-201ENST00000288599 KCNN3Q9UGI6 736 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 SUSD2Q9UGT4 822 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 ALS2Q96Q42 1657 aa4.42□□□□□ -1.7
NCOA1-201ENST00000288599 USP1O94782 785 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 ENDOD1O94919 500 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 POP4O95707 220 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 HNRNPLP14866 589 aaKnown RBP eCLIP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 ACO1P21399 889 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 BRCC3P46736 316 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 ARFIP1P53367 373 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 DYRK1AQ13627 763 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 EIF2B1Q14232 305 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MTHFD1LQ6UB35 978 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RNF19BQ6ZMZ0 732 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 UBE2Q1Q7Z7E8 422 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 SAPCD2Q86UD0 394 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 CACTIN-AS1Q8N1I8 211 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 ALLCQ8N6M5 410 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 SLC22A8Q8TCC7 542 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MED8Q96G25 268 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MFSD14AQ96MC6 490 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 CITED4Q96RK1 184 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 TGS1Q96RS0 853 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NANOGQ9H9S0 305 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 GPN1Q9HCN4 374 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 EIF3KQ9UBQ5 218 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RGS17Q9UGC6 210 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PCDHGA10Q9Y5H3 936 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RBM47A0AV96 593 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 M0QYV0 167 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 CLDN4O14493 209 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 XKRYO14609 159 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 FLRT2O43155 660 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 INMTO95050 263 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RAB36O95755 333 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PTGER2P43116 358 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MAGOHP61326 146 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 VBP1P61758 197 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 DPYSQ14117 519 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RRP1BQ14684 758 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 DPYSL2Q16555 572 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RABL6Q3YEC7 729 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MANEAQ5SRI9 462 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 GGNBP1Q5YKI7 109 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 ZNF57Q68EA5 555 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PLEKHH3Q7Z736 793 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 FAM35AQ86V20 835 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NLRP8Q86W28 1048 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 SLC13A5Q86YT5 568 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 HORMAD2Q8N7B1 307 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PHF21BQ96EK2 531 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 LINGO1Q96FE5 620 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 SEC16BQ96JE7 1060 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 IER2Q9BTL4 223 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 CNOT10Q9H9A5 744 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 FEM1BQ9UK73 627 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MROH5Q6ZUA9 1318 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 SLC27A2O14975 620 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 UBXN7O94888 489 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 GDF11O95390 407 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 H2AFZP0C0S5 128 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NQO1P15559 274 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 MGAT1P26572 445 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 OMPP47874 163 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NRLP54845 237 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RPS3AP61247 264 aaKnown RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PRKG2Q13237 762 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 RCAN2Q14206 197 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NR1D2Q14995 579 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 NADK2Q4G0N4 442 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 PERM1Q5SV97 790 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 GDF6Q6KF10 455 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-201ENST00000288599 H2AFVQ71UI9 128 aa4.41□□□□□ -1.7
NCOA1-201ENST00000288599 BOLLQ8N9W6 283 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms