RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SERPINF2P08697 491 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 LINC00271P0C7V0 271 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 COL6A2P12110 1019 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 GRK2P25098 689 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SKIV2L2P42285 1042 aaKnown RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SLC1A2P43004 574 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CD151P48509 253 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SLC1A6P48664 564 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 HTRA4P83105 476 aaPredicted RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SLC14A2Q15849 920 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SPDYAQ5MJ70 313 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CXorf57Q6NSI4 855 aaKnown RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 KIAA0408Q6ZU52 694 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CCDC91Q7Z6B0 441 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 MTDHQ86UE4 582 aaKnown RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 LCA5Q86VQ0 697 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SLC41A1Q8IVJ1 513 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 MFSD6LQ8IWD5 586 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 OR13J1Q8NGT2 312 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 OR6Y1Q8NGX8 325 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CALML6Q8TD86 181 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 ERP27Q96DN0 273 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CINPQ9BW66 212 aaPredicted RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SLC40A1Q9NP59 571 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 KCNK4Q9NYG8 393 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 RUVBL2Q9Y230 463 aaKnown RBP9.67□□□□□ -0.86
TRIM55-201ENST00000276573 CHD5Q8TDI0 1954 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 FAM95CA0A1B0GW59 222 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CFAP73A6NFT4 308 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 G3V2L1 256 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 GFRA2O00451 464 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ITM2AO43736 263 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TBL1XO60907 577 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RASSF9O75901 435 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 NDST3O95803 873 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 OLFM2O95897 454 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 FGBP02675 491 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 T-ENOLP0DO92 83 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 MYL2P10916 166 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RALBP11234 206 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 SAT1P21673 171 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CES1P23141 567 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RGRP47804 291 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZXDBP98169 803 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 SLC12A1Q13621 1099 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 LAMB3Q13751 1172 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 HSF5Q4G112 596 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 FBXW10Q5XX13 1052 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF470Q6ECI4 717 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF783Q6ZMS7 281 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 Q6ZNB5 142 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ARID3BQ8IVW6 561 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 GABPB2Q8TAK5 448 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 BRSK1Q8TDC3 778 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 HDAC10Q969S8 669 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TMA16Q96EY4 203 aaKnown RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TRIB3Q96RU7 358 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 LRRC3Q9BY71 257 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 NMRAL1Q9HBL8 299 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZFP69BQ9UJL9 534 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ACOT9Q9Y305 439 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 KCTD3Q9Y597 815 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CPQQ9Y646 472 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 NUMBLQ9Y6R0 609 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 MYLKQ15746 1914 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZBBXA8MT70 800 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CBX4O00257 560 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 INSIG1O15503 277 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 PHGDHO43175 533 aaKnown RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 DNAJC6O75061 913 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 UNC5CO95185 931 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 APOA4P06727 396 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 SLC35E2BP0CK96 405 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CR2P20023 1033 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 GABRR2P28476 465 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CRABP2P29373 138 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CA8P35219 290 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 LEPRP48357 1165 aaKnown RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 SCNN1BP51168 640 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ARSDP51689 593 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RAB10P61026 200 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 POU4F1Q01851 419 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ACVR1Q04771 509 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TAF1BQ53T94 588 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF789Q5FWF6 425 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CNSTQ6PJW8 725 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 GAREM2Q75VX8 874 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 ASRGL1Q7L266 308 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 GALNT7Q86SF2 657 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CEP97Q8IW35 865 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms