RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ALDH3A2P51648 485 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RBM20Q5T481 1227 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GCNT7Q6ZNI0 430 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 MED28Q9H204 178 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 POPDC2Q9HBU9 364 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 FADS3Q9Y5Q0 445 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 MAGEC1O60732 1142 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 METTL18O95568 372 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RAB10P61026 200 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 NFIXQ14938 502 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 MED22Q15528 200 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 CLEC10AQ8IUN9 316 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 BRSK2Q8IWQ3 736 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ZC3H7AQ8IWR0 971 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM47BQ8NA70 645 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 TDRD1Q9BXT4 1180 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SMURF2Q9HAU4 748 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SYNPO2Q9UMS6 1093 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 NKRFO15226 690 aaKnown RBP eCLIP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RGS10O43665 173 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PEX11AO75192 247 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ITGAVP06756 1048 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 AXLP30530 894 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 MNDAP41218 407 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GALK1P51570 392 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 NDST1P52848 882 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 CBX3Q13185 183 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 BTBD9Q96Q07 612 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RHOBTB2Q9BYZ6 727 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SENP6Q9GZR1 1112 aaPredicted RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ELOVL4Q9GZR5 314 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 DDX43Q9NXZ2 648 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ATF5Q9Y2D1 282 aaPredicted RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RPTORQ8N122 1335 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 CNTNAP2Q9UHC6 1331 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 G3V2T6 193 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 MPZL2O60487 215 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SGCGQ13326 291 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 CRTC3Q6UUV7 619 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SPATA19Q7Z5L4 167 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RNF180Q86T96 592 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ADAMTSL2Q86TH1 951 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 KIAA0895Q8NCT3 520 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 DNAJB14Q8TBM8 379 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 OR5F1O95221 314 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RPS12P25398 132 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RPL4P36578 427 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CCR4P51679 360 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RGS1Q08116 209 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 SULT1C3Q6IMI6 304 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 FRMD7Q6ZUT3 714 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 USP45Q70EL2 814 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 DEFB106AQ8N104 65 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 NAT14Q8WUY8 206 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 AGO4Q9HCK5 861 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 STOX2Q9P2F5 926 aaPredicted RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 IFT80Q9P2H3 777 aaPredicted RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 PCDHGA10Q9Y5H3 936 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 AZIN1O14977 448 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 PRODHO43272 600 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 HGFP14210 728 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 ERCC2P18074 760 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 TTPAP49638 278 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 PLK1P53350 603 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 ELP6Q0PNE2 266 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 PIK3R6Q5UE93 754 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CHST15Q7LFX5 561 aaPredicted RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 NIPA1Q7RTP0 329 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CITED4Q96RK1 184 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 TDRKHQ9Y2W6 561 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 GRIP1Q9Y3R0 1128 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 AP5Z1O43299 807 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CSH1P0DML2 217 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CSH2P0DML3 217 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 SERPINA4P29622 427 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 PRDX6P30041 224 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CLCN3P51790 818 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 CES3Q6UWW8 571 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 BTN2A1Q7KYR7 527 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 AMIGO2Q86SJ2 522 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RBM4BQ9BQ04 359 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RBM4Q9BWF3 364 aaKnown RBP8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 EHD4Q9H223 541 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 RASSF1Q9NS23 344 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 TRPS1Q9UHF7 1281 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 TELO2Q9Y4R8 837 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 A0A1W2PQ72 361 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 ENDOD1O94919 500 aa8.76□□□□□ -1.01
SCUBE3-201ENST00000274938 IFNA6P05013 189 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms