RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 HAO1Q9UJM8 370 aa15.46■□□□□ 0.07
SF3B4-201ENST00000271628 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
SF3B4-201ENST00000271628 PLXNA4Q9HCM2 1894 aa15.46■□□□□ 0.06
SF3B4-201ENST00000271628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 A8MUI8 341 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 SPATA31D3P0C874 917 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TARSP26639 723 aaKnown RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 GABRR2P28476 465 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 LBX1P52954 281 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 CDK18Q07002 472 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 SEPT6Q14141 434 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 SPATA31D4Q6ZUB0 917 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 DNAJC5GQ8N7S2 189 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 ARL14EPQ8N8R7 260 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 PEX13Q92968 403 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 VPS39Q96JC1 886 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 RAD9AQ99638 391 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 GPR22Q99680 433 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TUBB6Q9BUF5 446 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 EMILIN2Q9BXX0 1053 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 MTO1Q9Y2Z2 717 aaKnown RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 IRAK3Q9Y616 596 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 BPTFQ12830 3046 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 CCDC78A2IDD5 438 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 GOLGA8TH3BQL2 631 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TSPAN3O60637 253 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 AHSGP02765 367 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 FGF1P05230 155 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 T-ENOLP0DO92 83 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 MSLNQ13421 630 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 SIRPB2Q5JXA9 342 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TSTD2Q5T7W7 516 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 N4BP2L1Q5TBK1 243 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TXNDC8Q6A555 127 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 KIAA0408Q6ZU52 694 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 LCA5Q86VQ0 697 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 ZC3HC1Q86WB0 502 aaKnown RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 OR52K2Q8NGK3 314 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 SLC7A6OSQ96CW6 309 aaPredicted RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 ATXN7L3BQ96GX2 97 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 TRIM55Q9BYV6 548 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 MUC3BQ9H195 1237 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 LNPEPQ9UIQ6 1025 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 ZFP69BQ9UJL9 534 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 LSM7Q9UK45 103 aaKnown RBP15.45■□□□□ 0.06
SF3B4-201ENST00000271628 ZNF510Q9Y2H8 683 aa15.45■□□□□ 0.06
SF3B4-201ENST00000271628 H0Y626 953 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 PLIN3O60664 434 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 C1RP00736 705 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 RPSAP08865 295 aaKnown RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 PFKLP17858 780 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 SGSHP51688 502 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 TMPRSS15P98073 1019 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 PSRC1Q6PGN9 363 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 MAB21L3Q8N8X9 362 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 TMA16Q96EY4 203 aaKnown RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 SLC22A12Q96S37 553 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 NPHS2Q9NP85 383 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 BATF3Q9NR55 127 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 LZTS1Q9Y250 596 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 ARIH1Q9Y4X5 557 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 CPQQ9Y646 472 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 A0A096LPK6 155 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 MROH6A6NGR9 719 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 MUSKO15146 869 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 C8AP07357 584 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 ATXN1LP0C7T5 689 aaKnown RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 DNAJB1P25685 340 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 ARNTP27540 789 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 CDC25CP30307 473 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 ILF2Q12905 390 aaKnown RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 IHHQ14623 411 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 TAF1BQ53T94 588 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 PPM1JQ5JR12 505 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 RNF219Q5W0B1 726 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 CXorf57Q6NSI4 855 aaKnown RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 NEPROQ6NW34 567 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 CMC1Q7Z7K0 106 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 HJURPQ8NCD3 748 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
SF3B4-201ENST00000271628 KREMEN2Q8NCW0 462 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 PHOSPHO2Q8TCD6 241 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 BADQ92934 168 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 WBP2Q969T9 261 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 C7orf26Q96N11 449 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 GCNAQ96QF7 691 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 MECRQ9BV79 373 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 TBC1D10AQ9BXI6 508 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 SLC2A6Q9UGQ3 507 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 TLK1Q9UKI8 766 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 ANKRD6Q9Y2G4 727 aa15.44■□□□□ 0.06
SF3B4-201ENST00000271628 OBSL1O75147 1896 aa15.43■□□□□ 0.06
SF3B4-201ENST00000271628 TTC24A2A3L6 582 aaPredicted RBP15.43■□□□□ 0.06
SF3B4-201ENST00000271628 CBX4O00257 560 aa15.43■□□□□ 0.06
SF3B4-201ENST00000271628 TBL1XO60907 577 aa15.43■□□□□ 0.06
SF3B4-201ENST00000271628 C2P06681 752 aa15.43■□□□□ 0.06
SF3B4-201ENST00000271628 PTPN4P29074 926 aa15.43■□□□□ 0.06
SF3B4-201ENST00000271628 SLC7A9P82251 487 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms