RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ADRM1Q16186 407 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 ALKAL1Q6UXT8 129 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 ZBTB49Q6ZSB9 765 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 HNRNPABQ99729 332 aaKnown RBP27.75■■■□□ 2.03
CBX4-201ENST00000269397 SOCS2O14508 198 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 HTRA2O43464 458 aaPredicted RBP27.74■■■□□ 2.03
CBX4-201ENST00000269397 YWHAQP27348 245 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 GALNT2Q10471 571 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 PKN3Q6P5Z2 889 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 ZNF419Q96HQ0 510 aaPredicted RBP27.74■■■□□ 2.03
CBX4-201ENST00000269397 SPAG4Q9NPE6 437 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 OR12D3Q9UGF7 316 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 FBXW11Q9UKB1 542 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 FZD9O00144 591 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 NCAM2O15394 837 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 TAF6P49848 677 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 C6orf10Q5SRN2 563 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 RBM20Q5T481 1227 aaKnown RBP27.74■■■□□ 2.03
CBX4-201ENST00000269397 ZNF470Q6ECI4 717 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 DUS1LQ6P1R4 473 aaKnown RBP27.74■■■□□ 2.03
CBX4-201ENST00000269397 IL1RL2Q9HB29 575 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 FBRSL1Q9HCM7 1045 aaKnown RBP27.74■■■□□ 2.03
CBX4-201ENST00000269397 NSMCE4AQ9NXX6 385 aa27.74■■■□□ 2.03
CBX4-201ENST00000269397 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.73■■■□□ 2.03
CBX4-201ENST00000269397 SAC3D1A6NKF1 404 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 DFFAO00273 331 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 GNAO1P09471 354 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 UGT1A6P19224 532 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 CDK9P50750 372 aaKnown RBP27.73■■■□□ 2.03
CBX4-201ENST00000269397 NME5P56597 212 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 PRPSAP1Q14558 356 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 KIAA0319Q5VV43 1072 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 PIWIL4Q7Z3Z4 852 aaKnown RBP27.73■■■□□ 2.03
CBX4-201ENST00000269397 CHCHD3Q9NX63 227 aaKnown RBP27.73■■■□□ 2.03
CBX4-201ENST00000269397 MRASO14807 208 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 AKAP10O43572 662 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 NPHS1O60500 1241 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 GPC4O75487 556 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 LRIG2O94898 1065 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 ALDH3B2P48448 385 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 CLEC6AQ6EIG7 209 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 KLHL35Q6PF15 583 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 POTEHQ6S545 545 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 CHSY3Q70JA7 882 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 ERI1Q8IV48 349 aaKnown RBP27.73■■■□□ 2.03
CBX4-201ENST00000269397 FIBCD1Q8N539 461 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 CANT1Q8WVQ1 401 aa27.73■■■□□ 2.03
CBX4-201ENST00000269397 COL6A2P12110 1019 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 GRIA3P42263 894 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 SLC7A2P52569 658 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 ZNF789Q5FWF6 425 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 WSCD1Q658N2 575 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 TAPT1Q6NXT6 567 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 FICDQ9BVA6 458 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 TKTL2Q9H0I9 626 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 SPON1Q9HCB6 807 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 PNPLA3Q9NST1 481 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 DUS2Q9NX74 493 aaKnown RBP27.72■■■□□ 2.03
CBX4-201ENST00000269397 GDAP2Q9NXN4 497 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 CLCN2P51788 898 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 PCID2Q5JVF3 399 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 LRCH3Q96II8 777 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 MRPL57Q9BQC6 102 aaKnown RBP27.72■■■□□ 2.03
CBX4-201ENST00000269397 CIDEBQ9UHD4 219 aa27.72■■■□□ 2.03
CBX4-201ENST00000269397 CENPFP49454 3210 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 FAM149AA5PLN7 773 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 FOXD2O60548 495 aaPredicted RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 ATP5F1P24539 256 aaPredicted RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 SLC7A1P30825 629 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 CHRNA4P43681 627 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 LILRA4P59901 499 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 PLOD1Q02809 727 aaPredicted RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 RWDD4Q6NW29 188 aaKnown RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 NOTUMQ6P988 496 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 MOB2Q70IA6 237 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 ZNF560Q96MR9 790 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 TMEM30AQ9NV96 361 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 EBF1Q9UH73 591 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 TCRBV3S1A0A5B6 114 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 TPST1O60507 370 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 SEC24DO94855 1032 aaPredicted RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 SNRPB2P08579 225 aaKnown RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 CCDC166P0CW27 439 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 ETFBP38117 255 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 ARCN1P48444 511 aaKnown RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 SLC12A2P55011 1212 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 SEPT6Q14141 434 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 UGP2Q16851 508 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 ZNF772Q68DY9 489 aaPredicted RBP27.71■■■□□ 2.03
CBX4-201ENST00000269397 CUZD1Q86UP6 607 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 TBL1YQ9BQ87 522 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 DCUN1D5Q9BTE7 237 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 COLEC11Q9BWP8 271 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 ADAMTS10Q9H324 1103 aa27.71■■■□□ 2.03
CBX4-201ENST00000269397 MTSS1O43312 755 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 LRPAP1P30533 357 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 PRKCQQ04759 706 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 SQLEQ14534 574 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 ALDH16A1Q8IZ83 802 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 CD300AQ9UGN4 299 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms