RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 HMBOX1Q6NT76 420 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 TBL1YQ9BQ87 522 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 TRIM8Q9BZR9 551 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 MROH8Q9H579 483 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 STRNO43815 780 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 MMP3P08254 477 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PRPSAP1Q14558 356 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PCED1BQ96HM7 432 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 OLFM1Q99784 485 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 NDFIP2Q9NV92 336 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 SLCO1B7G3V0H7 640 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 SNAI1O95863 264 aaPredicted RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 DARSP14868 501 aaKnown RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 NR1H2P55055 460 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PELI3Q8N2H9 469 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 TMCO1Q9UM00 188 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 COL1A2P08123 1366 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PSMD12O00232 456 aaPredicted RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 MAGEB3O15480 346 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 TRMUO75648 421 aaKnown RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 CYP2C9P11712 490 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 YBX1P67809 324 aaKnown RBP17.05■□□□□ 0.32
RTN1-201ENST00000267484 LRP8Q14114 963 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PCID2Q5JVF3 399 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 DENND5AQ6IQ26 1287 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
RTN1-201ENST00000267484 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 UBDO15205 165 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 NCAM2O15394 837 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 TPST1O60507 370 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
RTN1-201ENST00000267484 NDST2P52849 883 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 EXT2Q93063 718 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 MAELQ96JY0 434 aaKnown RBP17.04■□□□□ 0.32
RTN1-201ENST00000267484 SAC3D1A6NKF1 404 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 ETFBP38117 255 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 SLC12A2P55011 1212 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 FRG1Q14331 258 aaKnown RBP17.04■□□□□ 0.32
RTN1-201ENST00000267484 RFTN1Q14699 578 aaPredicted RBP17.04■□□□□ 0.32
RTN1-201ENST00000267484 ARL13BQ3SXY8 428 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 KCTD13Q8WZ19 329 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 ABTB1Q969K4 478 aaPredicted RBP17.04■□□□□ 0.32
RTN1-201ENST00000267484 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 IPPQ9Y573 584 aa17.04■□□□□ 0.32
RTN1-201ENST00000267484 HEATR9A2RTY3 570 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TRPC5OSA6NMA1 111 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 SLC22A2O15244 555 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 GPC4O75487 556 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 WARSP23381 471 aaKnown RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 MYBPC3Q14896 1274 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 KRT80Q6KB66 452 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 CUZD1Q86UP6 607 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TAC4Q86UU9 113 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 FAM35AQ86V20 835 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 RPL10LQ96L21 214 aaKnown RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 IGSF5Q9NSI5 407 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 CNOT6Q9ULM6 557 aaKnown RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 A8MT66 165 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 PFDN1O60925 122 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 PENKP01210 267 aaPredicted RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 GNAO1P09471 354 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 HADHAP40939 763 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 SLC7A2P52569 658 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 RHDQ02161 417 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 SCAPQ12770 1279 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 ZNF792Q3KQV3 632 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TMEM126BQ8IUX1 230 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 DPF3Q92784 378 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 UNC93B1Q9H1C4 597 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 FBXO5Q9UKT4 447 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 LTBP3Q9NS15 1303 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 OTOFQ9HC10 1997 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TTC24A2A3L6 582 aaPredicted RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 PDLIM1O00151 329 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 SOCS2O14508 198 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 PTGESO14684 152 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 MRASO14807 208 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 ADSLP30566 484 aaPredicted RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 PNPLA4P41247 253 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 GRIA3P42263 894 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 C6orf10Q5SRN2 563 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 CANT1Q8WVQ1 401 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 GAB3Q8WWW8 586 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 MRPL57Q9BQC6 102 aaKnown RBP17.03■□□□□ 0.32
RTN1-201ENST00000267484 BRD8Q9H0E9 1235 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms