RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SLC39A4Q6P5W5 647 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 PRSS55Q6UWB4 352 aaPredicted RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 SMG7Q92540 1137 aaKnown RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 PRCCQ92733 491 aaPredicted RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 TADA1Q96BN2 335 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 SLCO1B3Q9NPD5 702 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 XPR1Q9UBH6 696 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 E9PAM4 449 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 RHOQP17081 205 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 GRIA4P48058 902 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 GPR15P49685 360 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 CCT8P50990 548 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 FAM98BQ52LJ0 330 aaKnown RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 OTOP3Q7RTS5 596 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 MAGEC3Q8TD91 643 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 PRRC2BQ5JSZ5 2229 aaKnown RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 BCLAF3A2AJT9 711 aaKnown RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 ZBTB22O15209 634 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 HDAC3O15379 428 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 DEAF1O75398 565 aaPredicted RBP15.53■□□□□ 0.08
TIMP3-201ENST00000266085 PDE5AO76074 875 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 TPSB2P20231 275 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 L1CAMP32004 1257 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 TPSAB1Q15661 275 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 FOXR1Q6PIV2 292 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 CCDC81Q6ZN84 652 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 DET1Q7L5Y6 550 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 SELENOMQ8WWX9 145 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 ELMO1Q92556 727 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 NR2E1Q9Y466 385 aa15.53■□□□□ 0.08
TIMP3-201ENST00000266085 NEDD8-MDP1E9PL57 170 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 ARVCFO00192 962 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 TACR2P21452 398 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 S100A5P33763 92 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 S100A3P33764 101 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 PHKG1Q16816 387 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 INSCQ1MX18 579 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 TNS4Q8IZW8 715 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 ATG16L2Q8NAA4 619 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 RHOJQ9H4E5 214 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 KIAA1522Q9P206 1035 aaPredicted RBP15.52■□□□□ 0.08
TIMP3-201ENST00000266085 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
TIMP3-201ENST00000266085 A0A1W2PPM1 405 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 C1QTNF3-AMACRE9PGA6 284 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 KPNA5O15131 536 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 DYRK3O43781 588 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 ZCCHC18P0CG32 403 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 TTC27Q6P3X3 843 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 ADAMTSL2Q86TH1 951 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 CXorf40AQ8TE69 158 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 TRPC4APQ8TEL6 797 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 CPT1BQ92523 772 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 VWA7Q9Y334 891 aa15.52■□□□□ 0.08
TIMP3-201ENST00000266085 ACRP10323 421 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 FECHP22830 423 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.07
TIMP3-201ENST00000266085 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.07
TIMP3-201ENST00000266085 CYP2A13Q16696 494 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 CMC1Q7Z7K0 106 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 OR52K2Q8NGK3 314 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 OR4L1Q8NH43 312 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 SCAMP5Q8TAC9 235 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 FIG4Q92562 907 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 TWNKQ96RR1 684 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 CCDC85CA6NKD9 419 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 CCL16O15467 120 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 TMEM63BQ5T3F8 832 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 TRIM69Q86WT6 500 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 FBXO22Q8NEZ5 403 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 ATL1Q8WXF7 558 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 PIK3R5Q8WYR1 880 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 GFM2Q969S9 779 aaKnown RBP15.52■□□□□ 0.07
TIMP3-201ENST00000266085 BDH2Q9BUT1 245 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 STK39Q9UEW8 545 aa15.52■□□□□ 0.07
TIMP3-201ENST00000266085 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 PHRF1Q9P1Y6 1649 aaKnown RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 A0A0U1RQF3 1178 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 PPEF2O14830 753 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 BIRC5O15392 142 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ABCB1P08183 1280 aaPredicted RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 GPR1P46091 355 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ATXN1P54253 815 aaKnown RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 SLC34A1Q06495 639 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 PARP15Q460N3 678 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 PAGE2BQ5JRK9 111 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 MLYCDO95822 493 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 POU1F1P28069 291 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 HTR7P34969 479 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 HOXD13P35453 343 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 FAM187BQ17R55 369 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 RAET1GQ6H3X3 334 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 KIAA1324Q6UXG2 1013 aaKnown RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 CYP4Z1Q86W10 505 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 LRRC15Q8TF66 581 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 COPS8Q99627 209 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms