RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 CENPTQ96BT3 561 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TSPAN17Q96FV3 270 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 SHCBP1LQ9BZQ2 653 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 ZDHHC6Q9H6R6 413 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 NOD2Q9HC29 1040 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.41□□□□□ -0.9
SSR3-201ENST00000265044 FNIP2Q9P278 1114 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 TCAF1Q9Y4C2 921 aa9.41□□□□□ -0.9
SSR3-201ENST00000265044 FAM95CA0A1B0GW59 222 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 LEFTY2O00292 366 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 GRM6O15303 877 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 PRAMEF11O60813 436 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 TMCC1O94876 653 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 MYL2P10916 166 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 POLR2EP19388 210 aaKnown RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 ASPHQ12797 758 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 NADSYN1Q6IA69 706 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 MYLK4Q86YV6 388 aaPredicted RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 SLC41A1Q8IVJ1 513 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 AFAP1L2Q8N4X5 818 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 CCT6BQ92526 530 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 CEP295NLQ96MC4 621 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 CASS4Q9NQ75 786 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 SNX15Q9NRS6 342 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 SLC2A6Q9UGQ3 507 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 PSAT1Q9Y617 370 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 DIAPH2O60879 1101 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 NDST3O95803 873 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 CPA3P15088 417 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 NCF2P19878 526 aaPredicted RBP9.4□□□□□ -0.9
SSR3-201ENST00000265044 MPP1Q00013 466 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 FAM83EQ2M2I3 478 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 OR4K2Q8NGD2 314 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 ZBP1Q9H171 429 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 GTSE1Q9NYZ3 720 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 WNT6Q9Y6F9 365 aa9.4□□□□□ -0.9
SSR3-201ENST00000265044 SLC9A3R1O14745 358 aaPredicted RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 SERPINA4P29622 427 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 CSE1LP55060 971 aaKnown RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 SNRPD1P62314 119 aaKnown RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 NAB1Q13506 487 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 ITGA9Q13797 1035 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 DLG2Q15700 870 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 QPCTQ16769 361 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 FSTL4Q6MZW2 842 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 GAREM2Q75VX8 874 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 CACUL1Q86Y37 369 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 KLHL29Q96CT2 875 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 DYRK4Q9NR20 520 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 FAM50BQ9Y247 325 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 MTO1Q9Y2Z2 717 aaKnown RBP9.4□□□□□ -0.91
SSR3-201ENST00000265044 SHROOM3Q8TF72 1996 aa9.4□□□□□ -0.91
SSR3-201ENST00000265044 DNAJC6O75061 913 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 C2P06681 752 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 GFAPP14136 432 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 SLC8A1P32418 973 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 MPP2Q14168 576 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 RARS2Q5T160 578 aaKnown RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 SNX30Q5VWJ9 437 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 KLHDC10Q6PID8 442 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ZNF689Q96CS4 500 aaPredicted RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 TCEAL4Q96EI5 215 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 DNAJC1Q96KC8 554 aaKnown RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 MRGPRX2Q96LB1 330 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 FCRL3Q96P31 734 aaPredicted RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 ZMYND15Q9H091 742 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 OR51F1A6NGY5 319 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 FAM159BA6NKW6 160 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 SHOX2O60902 331 aaPredicted RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 DCTN3O75935 186 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 IGFBP4P22692 258 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 PRKCHP24723 683 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 AKT1P31749 480 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 IRS1P35568 1242 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 SEMG2Q02383 582 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 NIPAL4Q0D2K0 466 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 GRM3Q14832 879 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 PBXIP1Q96AQ6 731 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 FETUBQ9UGM5 382 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ARL5AQ9Y689 179 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 C1orf232A0A0U1RR37 186 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 LINC01553A4QN01 128 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 TBC1D3BA6NDS4 549 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 KPNA3O00505 521 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms