RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 POLD2P49005 469 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 MAPK10P53779 464 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 DLG2Q15700 870 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 MBLAC2Q68D91 279 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 TMEM135Q86UB9 458 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 PDCD6IPQ8WUM4 868 aaKnown RBP16.44■□□□□ 0.22
CTCF-201ENST00000264010 ARNTL2Q8WYA1 636 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 TMEM209Q96SK2 561 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 VPS45Q9NRW7 570 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 CLPTM1O96005 669 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 SLC10A3P09131 477 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 ATAD1Q8NBU5 361 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 OR10T2Q8NGX3 314 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.44■□□□□ 0.223e-10■■■■■ 47.1
CTCF-201ENST00000264010 TSGA13Q96PP4 275 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 SLC25A51Q9H1U9 297 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 CYP4F12Q9HCS2 524 aa16.44■□□□□ 0.22
CTCF-201ENST00000264010 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 HDAC3O15379 428 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 ITM2AO43736 263 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MAGEC1O60732 1142 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 FYNP06241 537 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 NUDT2P50583 147 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 PDAP1Q13442 181 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 VEPH1Q14D04 833 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 ESRP1Q6NXG1 681 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 FAM171BQ6P995 826 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 DEFB107AQ8IZN7 70 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 BTN2A3PQ96KV6 586 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 EBF4Q9BQW3 602 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MLPHQ9BV36 600 aaPredicted RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 ENO3P13929 434 aaPredicted RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 DSG1Q02413 1049 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 PSMD5Q16401 504 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 CCT7Q99832 543 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 CINPQ9BW66 212 aaPredicted RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MRPL40Q9NQ50 206 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 XPR1Q9UBH6 696 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 BRCA1P38398 1863 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 PAPPA2Q9BXP8 1791 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MAN1A2O60476 641 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 SERPINF2P08697 491 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 T-ENOLP0DO92 83 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 CLCN5P51795 746 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 MAXP61244 160 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 SLC25A3Q00325 362 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 VARS2Q5ST30 1063 aaKnown RBP16.43■□□□□ 0.22
CTCF-201ENST00000264010 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 PTPRFP10586 1907 aa16.43■□□□□ 0.22
CTCF-201ENST00000264010 LCTP09848 1927 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 SYN3O14994 580 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 GLP2RO95838 553 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 GRK4P32298 578 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 HK2P52789 917 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 POU4F1Q01851 419 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 ILF2Q12905 390 aaKnown RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 LRRC74BQ6ZQY2 392 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 BEND5Q7L4P6 421 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 LIMS2Q7Z4I7 341 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTCF-201ENST00000264010 ULK2Q8IYT8 1036 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 KLHL5Q96PQ7 755 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 GATA5Q9BWX5 397 aaPredicted RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 POLR1EQ9GZS1 481 aaKnown RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 COG4Q9H9E3 785 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 EBF2Q9HAK2 575 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 ZNF212Q9UDV6 495 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 SLC27A5Q9Y2P5 690 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 SIN3BO75182 1162 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 PEX11AO75192 247 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 NDUFS3O75489 264 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 FGF3P11487 239 aaPredicted RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 ACLYP53396 1101 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 PCLAFQ15004 111 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 LRRC8EQ6NSJ5 796 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 LGI2Q8N0V4 545 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 MRPL1Q9BYD6 325 aaKnown RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 GRIP2Q9C0E4 1043 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 MAN1C1Q9NR34 630 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 TMLHEQ9NVH6 421 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 TLR6Q9Y2C9 796 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 E2F6O75461 281 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 TM7SF2O76062 418 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 NDST2P52849 883 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 SPPL2BQ8TCT7 592 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 GIPC2Q8TF65 315 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 JADE3Q92613 823 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 MRPL57Q9BQC6 102 aaKnown RBP16.42■□□□□ 0.22
CTCF-201ENST00000264010 KIFC1Q9BW19 673 aa16.42■□□□□ 0.22
CTCF-201ENST00000264010 ADA2Q9NZK5 511 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms