RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 OSBPL2Q9H1P3 480 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 ALG9Q9H6U8 611 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF408Q9H9D4 720 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 PCDHGA7Q9Y5G6 932 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 ASB14A6NK59 587 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 MEIS3P2A8K0S8 358 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 ACOT8O14734 319 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CD4P01730 458 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 FYNP06241 537 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CD151P48509 253 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 NDST2P52849 883 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 STX1BP61266 288 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 STX5Q13190 355 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 MARCH8Q5T0T0 291 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 DDI1Q8WTU0 396 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 TEKT5Q96M29 485 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 COLEC11Q9BWP8 271 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CNOT6Q9ULM6 557 aaKnown RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 MYRFQ9Y2G1 1151 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 ANKRD6Q9Y2G4 727 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CRYL1Q9Y2S2 319 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 A0A0J9YVX5 310 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 TADA2AO75478 443 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 DDNO94850 711 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CDH2P19022 906 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 ARL1P40616 181 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 HSPA13P48723 471 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 SULT2A1Q06520 285 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 C16orf72Q14CZ0 275 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 KLC3Q6P597 504 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CPNE9Q8IYJ1 553 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 OFCC1Q8IZS5 231 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 TMEM151AQ8N4L1 468 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 AFAP1L2Q8N4X5 818 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 ASB9Q96DX5 294 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
CHMP3-201ENST00000263856 FNDC3AQ9Y2H6 1198 aaKnown RBP12.5□□□□□ -0.41
CHMP3-201ENST00000263856 SLCO1B7G3V0H7 640 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 GNAO1P09471 354 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CPB1P15086 417 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF26P17031 533 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CHRM3P20309 590 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 NSUN2Q08J23 767 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 UGP2Q16851 508 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 FUT11Q495W5 492 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TBCELQ5QJ74 424 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PAQR9Q6ZVX9 377 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 EFHD1Q9BUP0 239 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 WDR6Q9NNW5 1121 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SPAG4Q9NPE6 437 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 THEGQ9P2T0 379 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CROTQ9UKG9 612 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 FBXO5Q9UKT4 447 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 MAGEB16A2A368 324 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 OR51F1A6NGY5 319 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TMX2-CTNND1H3BSU7 103 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SOCS2O14508 198 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CES1P23141 567 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 IREB2P48200 963 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 RPS6KA2Q15349 733 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PCID2Q5JVF3 399 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 KCTD11Q693B1 232 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 OR52K2Q8NGK3 314 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 SPPL2BQ8TCT7 592 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 MPP6Q9NZW5 540 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CEPT1Q9Y6K0 416 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PIRO00625 290 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 FBP2O00757 339 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 AP1G1O43747 822 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TFPTP0C1Z6 253 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 DAOAP59103 153 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 CHST15Q7LFX5 561 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms